Pairwise Alignments

Query, 355 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 940 a.a., ATP-dependent DNA ligase from Burkholderia phytofirmans PsJN

 Score = 93.6 bits (231), Expect = 2e-23
 Identities = 98/327 (29%), Positives = 144/327 (44%), Gaps = 24/327 (7%)

Query: 27  LPVSTAPMEARSATELPGGDAWQYEPKWDGFRCLA----FKSGDEVDIRAKSGKPLGRFF 82
           LP +  P  A      P GD W YE K+DG+R LA       G  V +  ++G      F
Sbjct: 276 LPTTFKPQLATLVDAAPPGDEWSYEIKFDGYRVLARIDRDAKGSAVKVFTRAGNDWTAKF 335

Query: 83  PEIVALLRRLEPDMFVLDGE-LVIEVDGRLSFDALQMRLHPAASRVQKLSQETPAKLILF 141
            + V    +L  +   LDGE +V++ +G  +F ALQ      A+R Q +       + LF
Sbjct: 336 SKQVKAFEQLGIESAWLDGEAVVLDPNGVPNFQALQNAFD--ANRPQDII------VYLF 387

Query: 142 DMLAGTDGTILTGEPLQTRRACLEAFAKKNAVAEMLESSPFTLDIKEAERWLTSWEAGAT 201
           D +   +G  L G PL+ RRA L A  +    + +  S+ F      AE  L S    A 
Sbjct: 388 D-IPFLNGYDLRGVPLEQRRAILHALMEDVDDSVLRFSNNFDF---SAEDLLRSACDMAL 443

Query: 202 DGVVAKRRDGVYECGERA-MVKVKRLKTADCVVGGFRYESDS-SLVGSLLLGLYDTEGLL 259
           +G++ KRRD  Y  G  +  +K+K  +  + V+GG+   S S +  G+LLLG+YD++G L
Sbjct: 444 EGIIGKRRDSGYLSGRSSTWIKLKCRRRQEFVIGGYSEPSGSRAAFGALLLGVYDSKGNL 503

Query: 260 NHVGFTATISDKERPALTNQLEALREPPGFTGKAPGGPSRWSSERSGEWEPVRPELVVEV 319
           N+ G   T  D    AL   ++   +             R  S     W  V P LV E 
Sbjct: 504 NYAGRVGTGFD---AALLRSVKKELDAHATKRMPFAAVPRERSRTPVHW--VEPVLVAEC 558

Query: 320 RFDHVSNRRFRHGTKLMRWRPDKDPRQ 346
            F   ++         +  R DK  RQ
Sbjct: 559 NFAEWTSDGIVRQASFVSLRNDKPARQ 585