Pairwise Alignments

Query, 709 a.a., signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 830 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  355 bits (912), Expect = e-102
 Identities = 201/555 (36%), Positives = 314/555 (56%), Gaps = 9/555 (1%)

Query: 134 LKASEERLNLMLQGANDAAWDWDLRQHTVYYSPRWWQMIGREPDELEPTEDLWVKLLHPD 193
           LK SE+R    ++ +    WDW+L  ++V+ S RW  M+G  P++L P    W   LHP+
Sbjct: 260 LKDSEQRWLFAVEVSRYGIWDWNLEDNSVFLSDRWKDMLGYGPEDLVPELATWESRLHPE 319

Query: 194 DYQKVMDKMNGLFDRSGPSSFDTEFRLQTKSGSYLPVLCRGVILRGAD-GTPLRMSGTNM 252
           D + ++  +N   +      F++  RL+ + G Y+ VL RG+ +   + G PLRM GT  
Sbjct: 320 DKEGILKNLNAYLNGE-TEEFESVHRLRHQQGHYIWVLDRGMTVEWNEKGKPLRMIGTLS 378

Query: 253 DLTERKESEARIYQLAYYDVLTGLANRTLLMERLKAAIALCERSKQIGALLIIDLDNFKI 312
           D+TE   ++      A +D LT LANR  LM+ L       + S    AL ++DLDNFK+
Sbjct: 379 DVTEDIRNQKAAMHQAKHDPLTDLANRRALMDALYQQQ---DESGSCTALFMLDLDNFKV 435

Query: 313 LNDTMGHDVGDALLKMVADRLLQAVRRCELVARLGGDEFVIVMENLGIDERGAALKAKSV 372
           +ND +GH  GD LL  +A RL        L+AR+  DEFV++++ L  D  GA  +A+++
Sbjct: 436 VNDALGHHGGDRLLIQIAARLSSYFSSNSLIARVAADEFVVLVKKLPEDLLGAQRRAQAL 495

Query: 373 GQKVRGLLNDPFMLAGKQLRTSPSIGIALF--AEGRPGLEELLKQADVAMYQAKEAGKNA 430
             ++R L+   F ++G     S S+GIA+   +E  P  E+ LK+ ++A+ QAKE+G++A
Sbjct: 496 ASQMRQLIARSFHISGHTFNLSASVGIAIIDPSETIPP-EQQLKRVNMALAQAKESGRDA 554

Query: 431 LRFFDPAMQAAVEERVALENDLRNGVLENEFRLFCQPQVDACGRLCGGEVLIRWQHPVRG 490
              +   M     + + +  +L + V  ++  LF QP ++A G +   E L+RW HP  G
Sbjct: 555 CVVYSSEMDKRAAQNLMIRTELVHAVTRHQLSLFYQPLLNAKGEIASVEALLRWHHPQHG 614

Query: 491 LVMPNQFIPLAEQTDLIIPIGEWVLRKTCETLVEWESHPSLAQISLSVNVSVNQVRDHNF 550
            + P  FIP+AE + LI+ +GEWVL + C   +       +    +S+NVS  Q     F
Sbjct: 615 AISPADFIPVAEGSALIVELGEWVLLEACR-FIRGLQEQGIRPPMVSINVSARQFHQDEF 673

Query: 551 VERVLAIIDDCGANPARIMLELTESLMAENVEEIILKMNALRVRGVRFSVDDFGTGYSSL 610
             ++L ++ D G +PA I LELTE ++  +++++   M  LR  GV  +VDDFGTGYSSL
Sbjct: 674 APKLLVMLKDQGISPAHIELELTEHVLLTDLQQVRQTMTQLREAGVSIAVDDFGTGYSSL 733

Query: 611 SYLKRFPLSELKIDQSFVREIALNQHDAVITEIIITLAKKLGLGVLAEGVETEDQLNFLL 670
           SYL+  PL+ LK+D SF+R++      A I + +I ++  L L  +AEGVE + Q   L 
Sbjct: 734 SYLQELPLNRLKLDASFIRDMGNGDASASIVKAMIDMSHSLNLEFVAEGVEIQSQFEQLK 793

Query: 671 AHDCSYFQGYLFGKP 685
           A+ C  +QGYLF +P
Sbjct: 794 AYRCDLYQGYLFHRP 808