Pairwise Alignments

Query, 709 a.a., signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 714 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  348 bits (893), Expect = e-100
 Identities = 191/454 (42%), Positives = 275/454 (60%), Gaps = 8/454 (1%)

Query: 241 DGTPLRMSGTNMDLTERKESEARIYQLAYYDVLTGLANRTLLMERLKAAIALCERSKQIG 300
           +G  L       D++ERKE+EARI+ LA+YD LT L NR L  +R   A+    R  Q  
Sbjct: 252 EGAVLNYVAMWSDISERKEAEARIHYLAHYDALTDLPNRVLFNDRFTQALIHARRYDQSV 311

Query: 301 ALLIIDLDNFKILNDTMGHDVGDALLKMVADRLLQAVRRCELVARLGGDEFVIVMENLGI 360
           AL+ +DLD FK++NDT+GH VGD LLK VA+RL + VR  + V+R GGDEFV+++ NL +
Sbjct: 312 ALMFVDLDRFKVVNDTLGHRVGDELLKQVAERLRRCVREEDTVSRQGGDEFVVLLANLDM 371

Query: 361 DERGAALKAKSVGQKVRGLLNDPFMLAGKQLRTSPSIGIALFAEGRPGLEELLKQADVAM 420
               A      V  K+   L +P    G +L  + SIGIA +       + L+K AD+AM
Sbjct: 372 SADAAV-----VSDKILEALAEPMYFEGHELSVTCSIGIACYPSDGADPDTLMKNADLAM 426

Query: 421 YQAKEAGKNALRFFDPAMQAAVEERVALENDLRNGVLENEFRLFCQPQVD-ACGRLCGGE 479
           Y+AK  G+N  +FF P ++     R+ LEN +R  +  +EF L   PQVD   GRL   E
Sbjct: 427 YRAKSVGRNNYQFFSPELEQGALTRLTLENAMRRALDRDEFELHYLPQVDNPSGRLLSLE 486

Query: 480 VLIRWQHPVRGLVMPNQFIPLAEQTDLIIPIGEWVLRKTCETLVEWESHPSLAQISLSVN 539
            LIRWQHP RGL++P+QFIPLAE++ L++PI  WVLR+    L +W    +L  + +++N
Sbjct: 487 ALIRWQHPERGLLLPSQFIPLAEESGLVLPISLWVLRRVARQLADWR-RQNLTLVPVAIN 545

Query: 540 VSVNQVRDHNFVERVLAIIDDCGANPARIMLELTESLMAENVEEIILKMNALRVRGVRFS 599
           +   Q+R  +F E +  I+ + G     I LE TE  +  + E  +  ++AL+  GV  +
Sbjct: 546 LCEAQLRQPDFAEALGRILSEEGVEGRWIELEFTEGALMHDTERNLRVLSALKRLGVGIT 605

Query: 600 VDDFGTGYSSLSYLKRFPLSELKIDQSFVREIALNQHDAVITEIIITLAKKLGLGVLAEG 659
           +DDFG GYS+L+ L+R P+  LKID+S V ++  N+ DAVI + II++A+ + L V+AEG
Sbjct: 606 LDDFGVGYSNLNVLRRLPVDTLKIDRSLVTDVTRNEDDAVIVDAIISMAQSMNLKVVAEG 665

Query: 660 VETEDQLNFLLAHDCSYFQGYLFGKPC-AIELFA 692
           VET DQ  F  A  C+  QG+ F K   A+E+ A
Sbjct: 666 VETADQAGFFKARACAEIQGHFFSKAIGAVEVAA 699