Pairwise Alignments

Query, 709 a.a., signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 640 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  352 bits (902), Expect = e-101
 Identities = 209/520 (40%), Positives = 298/520 (57%), Gaps = 26/520 (5%)

Query: 171 MIGREPDELEPTEDLWVKLLHPDDYQKVMDKMNGLFDRSGPSSFDTEFRLQ----TKSGS 226
           ++G  P E+ P  DL  K    DD + +  +   L +     S D+E R +     K+ +
Sbjct: 129 ILGHSPREVYPA-DLAAKY-RQDDLRVLQGETLNLIEEM--VSLDSEQRKRYIEIVKTPT 184

Query: 227 YLPVLCRGVILRGADGTPLRMSGTNMDLTERKESEARIYQLAYYDVLTGLANRTLLMERL 286
           Y P           DG+   + G   D+T RK +E +I  LA++D LT L NR LL +R 
Sbjct: 185 YAP-----------DGSINGIQGIFWDITARKSAEEQIEYLAHHDPLTDLPNRVLLRDRF 233

Query: 287 KAAIALCERSKQIGALLIIDLDNFKILNDTMGHDVGDALLKMVADRLLQAVRRCELVARL 346
             A     RS    A+L +DLD+FK++NDT+GH +GD LL+ VA+RL + VR  + ++R 
Sbjct: 234 LQAQGQAARSANRVAILFLDLDHFKLVNDTLGHPIGDRLLQAVAERLRRGVRETDTISRQ 293

Query: 347 GGDEFVIVMENLGIDERGAALKAKSVGQKVRGLLNDPFMLAGKQLRTSPSIGIALFAEGR 406
           GGDEFVIV+  L   E   ++  K + Q     +++P  + G +L  + S+GIAL+ +  
Sbjct: 294 GGDEFVIVLPELADPESAGSIAGKLMEQ-----MHEPVRVNGHRLNVTFSLGIALYPDDG 348

Query: 407 PGLEELLKQADVAMYQAKEAGKNALRFFDPAMQAAVEERVALENDLRNGVLENEFRLFCQ 466
              + L+K+AD AMY AKEAG+N LRFF  AM      R+ L+N L+  + + E  L+ Q
Sbjct: 349 EDFDTLMKKADTAMYSAKEAGRNTLRFFTAAMNVEAAARLKLQNRLQRALEKEELVLYYQ 408

Query: 467 PQVD-ACGRLCGGEVLIRWQHPVRGLVMPNQFIPLAEQTDLIIPIGEWVLRKTCETLVEW 525
           PQ D A GR+ G E L+RW+ P RGLV P +FIP+AE T LI PIGEWV+ + C  L  W
Sbjct: 409 PQFDLASGRILGTEALLRWRDPERGLVPPGEFIPVAEDTGLIGPIGEWVIGEACRELRRW 468

Query: 526 ESHPSLAQISLSVNVSVNQVRDHNFVERVLAIIDDCGANPARIMLELTESLMAENVEEII 585
                   ++++VN+S  Q R    VE     + +       +  ELTESL+      I+
Sbjct: 469 HE-AGATDLTMAVNLSPVQFRRSRLVEIAARALQENRLPAECLEFELTESLLIREDAAIL 527

Query: 586 LKMNALRVRGVRFSVDDFGTGYSSLSYLKRFPLSELKIDQSFVREIALNQHDAVITEIII 645
             + AL+  GV+ S+DDFGTGYSSL+YLKRF + +LKIDQSF+RE+  N  D  I   +I
Sbjct: 528 ETLTALKGLGVKLSIDDFGTGYSSLAYLKRFNVDKLKIDQSFIRELCSNPDDEAIVSAVI 587

Query: 646 TLAKKLGLGVLAEGVETEDQLNFLLAHDCSYFQGYLFGKP 685
           T+A++L L  +AEGVE  +Q   L   DC   QG+LFG+P
Sbjct: 588 TMARQLRLRTVAEGVENAEQATMLRRFDCDEVQGFLFGRP 627