Pairwise Alignments

Query, 709 a.a., signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 833 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  346 bits (888), Expect = 2e-99
 Identities = 225/602 (37%), Positives = 323/602 (53%), Gaps = 17/602 (2%)

Query: 91  RPVAKDVAWVLCNAFPSIGEDGEVLQVITCFTDISALKHAEEALKASEERLNLMLQGAND 150
           R  + +V W   +   S  E GE   +I    DI+     EE L+   +    + +  ++
Sbjct: 239 RKKSGEVFWASVSLSLSRNEAGEPAGLIGYLVDITNQLEREEKLRLHAK----IFEHNSE 294

Query: 151 AAWDWDLRQHTVYYSPRWWQMIGREPDELEPTEDLWVKLLHPDDYQKVMDKMNGLFDRSG 210
           A    D  Q  +  +  +  + G    E E    L   L    D   +  ++      SG
Sbjct: 295 AVIVTDAMQRVLSVNKAFCDITGFS--EAEVRMSLPALLQPTRDDPNLAAEIQVALASSG 352

Query: 211 PSSFDTEFRLQTKSGSYLPVLCRGVILRGADGTPLRMSGTNMDLTERKESEARIYQLAYY 270
             ++  E   + K+G   PV      ++   G          D++ERKE+E +IY+LAYY
Sbjct: 353 --AWQGELWDRRKNGDTYPVWVSISSVKNTRGILSHYFLVFSDISERKEAERQIYRLAYY 410

Query: 271 DVLTGLANRTLLMERLKAAIALCERSKQIGALLIIDLDNFKILNDTMGHDVGDALLKMVA 330
           D LTGL NR+LL   L+ A+   +R++  GA+L +DLD FK +ND+ GH   DALLK VA
Sbjct: 411 DALTGLPNRSLLFSLLEQALIEAQRNQTHGAVLFVDLDRFKTINDSFGHAPADALLKEVA 470

Query: 331 DRLLQAVRRCELVARLGGDEFVIVMENLGIDERGAALKAKSVGQKVRGLLNDPFMLAGKQ 390
            RL + +R  ++VARLGGDEF++ + ++   E  A      VGQK+   L +PF +   +
Sbjct: 471 RRLQETLRAEDVVARLGGDEFIVALFDITKREHAAL-----VGQKILDALAEPFQIVHHE 525

Query: 391 LRTSPSIGIALFAEGRPGLEELLKQADVAMYQAKEAGKNALRFFDPAMQAAVEERVALEN 450
           +  + SIGIA+F +     E LL+ AD AMY+ K+     L F+   M     ER+ LE 
Sbjct: 526 VLLTASIGIAVFPDDGRDAETLLRNADTAMYRVKQTSGGPL-FYSQEMNLRSLERLKLEG 584

Query: 451 DLRNGVLENEFRLFCQPQVD-ACGRLCGGEVLIRWQHPVRGLVMPNQFIPLAEQTDLIIP 509
            LR  V   EFRL+ QPQV+ A GR+ G E LIRW HP +G++ P  FIPLAE+T LI+ 
Sbjct: 585 ALRKAVERQEFRLYYQPQVELATGRIVGAEALIRWHHPEQGMIPPTAFIPLAEETGLIVS 644

Query: 510 IGEWVLRKTCETLVEWESHPSLAQISLSVNVSVNQVRDHNFVERVLAIIDDCGANPARIM 569
           IG WVL   C     W        ++++VN+S  Q R     + V   ++        + 
Sbjct: 645 IGAWVLDAACRQGRLWRE-AGYEDLTIAVNLSPRQFRP-GLSQLVNETLERHAFPGENLE 702

Query: 570 LELTESLMAENVEEIILKMNALRVRGVRFSVDDFGTGYSSLSYLKRFPLSELKIDQSFVR 629
           LE+TE ++  N E +I  +      GVR ++DDFGTGYSSL+YLK+FP+  LKID+SFV 
Sbjct: 703 LEITEGMLMHNSEAVIQMLEDFHQAGVRLALDDFGTGYSSLAYLKKFPIDNLKIDRSFVS 762

Query: 630 EIALNQHDAVITEIIITLAKKLGLGVLAEGVETEDQLNFLLAHDCSYFQGYLFGKPCAIE 689
            I  +  D+ I + II++AK L L V+AEGVETE+QL+FL A  C   QGYLF  P  +E
Sbjct: 763 GIPHDGDDSAIAKAIISMAKNLRLLVIAEGVETEEQLDFLRAAGCDEIQGYLFSPPVPVE 822

Query: 690 LF 691
            F
Sbjct: 823 DF 824