Pairwise Alignments

Query, 709 a.a., signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 889 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  370 bits (951), Expect = e-106
 Identities = 225/562 (40%), Positives = 326/562 (58%), Gaps = 27/562 (4%)

Query: 133 ALKASEERLNLMLQGANDAAWDWD--LRQHTVYYSPRWWQMIGREPDEL--EPTEDLWVK 188
           A   S  R+  +L    D AW  D   R H V  +  + +M G+  +E+  +    +W  
Sbjct: 325 AYDESSSRIRALLDSIPDLAWIKDNAFRFHAV--NEAYARMCGKPAEEIVGKTVFQVW-- 380

Query: 189 LLHPDDYQKVMDKMNGLFDRSG-PSSFD---TEFRLQTKSGSYLPVLCRGVILRGADGTP 244
              P+   +     +     SG P  F+   T    Q ++  Y+ V      +   +G  
Sbjct: 381 ---PEALARTFQNHDEAVLASGKPGHFEVLVTNGEGQPRTLDYIRVP-----VHNEEGEV 432

Query: 245 LRMSGTNMDLTERKESEARIYQLAYYDVLTGLANRTLLMERLKAAIALCERSKQIGALLI 304
           + M+G   D+TERKE+EARI  LA +D LT L NR+LL  R+  AI     S+   ALL+
Sbjct: 433 VGMAGIARDITERKEAEARIRHLAEHDALTDLPNRSLLSSRMADAINRSVGSQAPMALLL 492

Query: 305 IDLDNFKILNDTMGHDVGDALLKMVADRLLQAVRRCELVARLGGDEFVIVMENLGIDERG 364
           +DLD+FK +ND++GH+VGD LL++ A+RL   +   + ++R GGDEF I++        G
Sbjct: 493 LDLDHFKNINDSLGHEVGDKLLQLAAERLRHTLDAADTLSRSGGDEFAILLTECS----G 548

Query: 365 AALKAKSVGQKVRGLLNDPFMLAGKQLRTSPSIGIALFAEGRPGLEELLKQADVAMYQAK 424
           A +  + + Q++   +  PF + G +L  S S+GI+++      L  LLK AD AMY AK
Sbjct: 549 APMIGR-IAQRLLETMAQPFNVDGHELVLSASVGISMYPHDGTDLGALLKNADAAMYSAK 607

Query: 425 EAGKNALRFFDPAMQAAVEERVALENDLRNGVLENEFRLFCQPQVDACGR-LCGGEVLIR 483
            AG+N  +FF P M A V ER++LEN LR  +   E  L+ QPQ    G    G E L+R
Sbjct: 608 AAGRNTYQFFTPEMNARVFERLSLENSLRKALPRQELMLYYQPQYRVGGGDPIGFEALLR 667

Query: 484 WQHPVRGLVMPNQFIPLAEQTDLIIPIGEWVLRKTCETLVEWESHPSLAQISLSVNVSVN 543
           W+HP  GLV P +FIP+AE+T+LI+PIGEWVL + C   + W+     A  +++VN+S  
Sbjct: 668 WRHPELGLVPPARFIPIAEETNLILPIGEWVLAEACRQQMAWQRAGQPAT-TVAVNLSPV 726

Query: 544 QVRDHNFVERVLAIIDDCGANPARIMLELTESLMAENVEEIILKMNALRVRGVRFSVDDF 603
           Q R  N V  V  ++ + G   A++ LE+TESL+ ++ E  +  ++ L+  G+R S+DDF
Sbjct: 727 QFRQRNLVSLVQRVLAETGLPAAQLELEITESLLMDDTERAVEVLHELKSLGIRLSLDDF 786

Query: 604 GTGYSSLSYLKRFPLSELKIDQSFVREIALNQHDAVITEIIITLAKKLGLGVLAEGVETE 663
           GTGYSSLSYLKRFPL ++KIDQSFVR++  +  DA I + II +A KL LGV+AEGVE +
Sbjct: 787 GTGYSSLSYLKRFPLDKIKIDQSFVRDMIKDSGDAAIIQAIIAIAAKLELGVIAEGVENQ 846

Query: 664 DQLNFLLAHDCSYFQGYLFGKP 685
            QL++L  H C   QGYLF  P
Sbjct: 847 SQLDYLALHQCGEVQGYLFSPP 868