Pairwise Alignments

Query, 709 a.a., signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 639 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  365 bits (938), Expect = e-105
 Identities = 216/575 (37%), Positives = 321/575 (55%), Gaps = 25/575 (4%)

Query: 134 LKASEERLNLMLQGANDAAWDWDLRQHTVYYSPRWWQMIGREPDELEPTEDLWVKLLHPD 193
           L+ +     L ++GA+D  W W+     +    R   ++G   + L  T   W+ L+HP+
Sbjct: 75  LRRAARAYELAMEGAHDGMWTWNPLSKELTAGQRLHAILGYGENFLMDTH-AWLTLVHPE 133

Query: 194 DYQK----VMDKMNGLFDRSGPSSFDTEFRLQTKSGSYLPVLCRGVILRGADGTPLRMSG 249
           D  +    V + + GL        F  E+R++ KSG Y  +  RG+ +R A G    M+G
Sbjct: 134 DTARYNRAVSEHLKGLTPH-----FYCEYRVRAKSGEYRWIASRGIAVRDARGVATLMAG 188

Query: 250 TNMDLTERKESEARIYQLAYYDVLTGLANRTLLMERLKAAIALCERSKQIGALLIIDLDN 309
           +  D+TERK  E R+  LA++D LTGL NR LL +RL  A+   +R +   A+L +DLD 
Sbjct: 189 SVTDITERKLHEERMRYLAHHDQLTGLPNRLLLADRLPQALTRAKRQQSRAAVLFVDLDR 248

Query: 310 FKILNDTMGHDVGDALLKMVADRLLQAVRRCELVARLGGDEFVIVMENLGIDERGAALKA 369
           FK +ND++GH+ GD LL+ VA RL + +R+ + + R GGDEF++++E+L + E     +A
Sbjct: 249 FKNINDSLGHNQGDRLLQSVARRLQECLRQSDTIVRQGGDEFIVILEDLQLPE-----QA 303

Query: 370 KSVGQKVRGLLNDPFMLAGKQLRTSPSIGIALFAEGRPGLEELLKQADVAMYQAKEAGKN 429
             +G K+   L  P+   G     + SIGIAL+ +     + LL+ AD AMY+ K +G N
Sbjct: 304 GQIGAKLLETLASPYREDGYDFFLTASIGIALYPDDGDDADTLLRNADTAMYEGKSSGGN 363

Query: 430 ALRFFDPAMQAAVEERVALENDLRNGVLENEFRLFCQPQVD-ACGRLCGGEVLIRWQHPV 488
            +RF+   M   ++ RV+LEN LR  +  +E +L+ QPQ+D A GRL G E L+RW    
Sbjct: 364 TVRFYTGRMNERLQSRVSLENGLRRALERDELQLYYQPQIDLASGRLLGAEALLRWNDGG 423

Query: 489 RGLVMPNQFIPLAEQTDLIIPIGEWVLRKTCETLVEWESHPSLAQ------ISLSVNVSV 542
           R L+ P+QFIP+AE+T LI+PIG WVL         W  H  L Q        +++N+S 
Sbjct: 424 R-LIPPDQFIPVAEETGLIVPIGLWVLDTAIARAAAWRRHWQLRQGMGATPPRIAINLSA 482

Query: 543 NQVRDHNFVERVLAIIDDCGANPARIMLELTESLMAENVEEIILKMNALRVRGVRFSVDD 602
            Q       E VL  ++  G  P+ I LE+TES++     + + ++  LR  GV  ++DD
Sbjct: 483 RQFWGGGIAEHVLLRLEREGLPPSTIELEVTESVLLRQEADCLEELRRLREAGVGLALDD 542

Query: 603 FGTGYSSLSYLKRFPLSELKIDQSFVREIALNQ--HDAVITEIIITLAKKLGLGVLAEGV 660
           FGTGYSSLSYL+  P+  LKID+SF+  +  +Q    A I   I+ +A  LG  V+AEGV
Sbjct: 543 FGTGYSSLSYLRLLPIDTLKIDKSFIFPLDEDQDGEAAAIVRAILAMAHTLGHKVVAEGV 602

Query: 661 ETEDQLNFLLAHDCSYFQGYLFGKPCAIELFASSF 695
           E + QL  L    C  FQGYL  +P   E F   +
Sbjct: 603 ERQTQLELLRTMGCDSFQGYLESRPLPPEAFLQRY 637