Pairwise Alignments

Query, 709 a.a., signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 974 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  367 bits (943), Expect = e-105
 Identities = 216/475 (45%), Positives = 275/475 (57%), Gaps = 9/475 (1%)

Query: 221 QTKSGSYLPVLCRGVILRGADGTPLRMSGTNMDLTERKESEARIYQLAYYDVLTGLANRT 280
           + K G   P       +  A GT         DLTE K ++ RI  LA +D LTGL NR 
Sbjct: 484 RAKDGRIHPQWAAISAVADAAGTVSNYIAIYSDLTEHKAAQDRIQFLAQHDPLTGLPNRM 543

Query: 281 LLMERLKAAIALCERSKQIGALLIIDLDNFKILNDTMGHDVGDALLKMVADRLLQAVRRC 340
           LL +RL  AIA   R      +L IDLD FK +ND++GH VGD L+K V  RL  AVR  
Sbjct: 544 LLQDRLTVAIAAAAREGHEVGVLFIDLDRFKTINDSLGHSVGDELIKGVTKRLQDAVRES 603

Query: 341 ELVARLGGDEFVIVMENLGIDERGAALKAKSVGQKVRGLLNDPFMLAGKQLRTSPSIGIA 400
           + V+RLGGDEF++V+  +   E  A      V   V   L  PF +AGK+LR + SIGI+
Sbjct: 604 DTVSRLGGDEFIVVLHRIRRSEDAA-----HVADAVLAQLTAPFNIAGKELRVTASIGIS 658

Query: 401 LFAEGRPGLEELLKQADVAMYQAKEAGKNALRFFDPAMQAAVEERVALENDLRNGVLENE 460
           +F       E L+K AD AM+ AKE G+N  +FF P M A   ER+ALEN LR  V   E
Sbjct: 659 VFPADGEDEEGLIKNADTAMFHAKERGRNNYQFFRPEMNARAGERLALENSLRGAVQRKE 718

Query: 461 FRLFCQPQVDA-CGRLCGGEVLIRWQHPVRGLVMPNQFIPLAEQTDLIIPIGEWVLRKTC 519
           F LF QPQV+   GRL G E LIRW+    G V P  FIPLAE+T  I+ IG+WVL + C
Sbjct: 719 FVLFYQPQVEIRSGRLVGAEALIRWRRGDSGFVSPADFIPLAEETGTILEIGDWVLAEAC 778

Query: 520 ETLVEWESH---PSLAQISLSVNVSVNQVRDHNFVERVLAIIDDCGANPARIMLELTESL 576
              V+W+       L  + ++VN+S  Q R  +F E +L I+ D      RI LELTES+
Sbjct: 779 RQQVQWDQQWPAMGLKPVPVAVNLSSLQFRQKHFKENLLDIVGDYPLPAGRIELELTESI 838

Query: 577 MAENVEEIILKMNALRVRGVRFSVDDFGTGYSSLSYLKRFPLSELKIDQSFVREIALNQH 636
           + E  E++   +  L+  G+R S+DDFGTGYSSLSYLKRFPL +LKID SFVR+I  +  
Sbjct: 839 VMEEPEQVGAVLAELKQAGLRLSIDDFGTGYSSLSYLKRFPLDKLKIDASFVRDIVNDSA 898

Query: 637 DAVITEIIITLAKKLGLGVLAEGVETEDQLNFLLAHDCSYFQGYLFGKPCAIELF 691
           D  I   +++L   LGL V+AEGVE E +L  L A  C   QGY F +P   E F
Sbjct: 899 DLAIVHAVVSLGHSLGLKVVAEGVEHEAELLILNAMGCDIAQGYHFCRPVPAEEF 953