Pairwise Alignments

Query, 709 a.a., signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 651 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  345 bits (886), Expect = 3e-99
 Identities = 197/469 (42%), Positives = 281/469 (59%), Gaps = 8/469 (1%)

Query: 223 KSGSYLPVLCRGVILRGADGTPLRMSGTNMDLTERKESEARIYQLAYYDVLTGLANRTLL 282
           K+G   P       +R     P+   G  +DL+  + SE ++  LA++D LT L NRTL 
Sbjct: 170 KNGETYPQWLTISTVRDEAHQPVSYVGVFLDLSPIRRSEQKLLHLAHHDPLTDLPNRTLF 229

Query: 283 MERLKAAIALCERSKQIGALLIIDLDNFKILNDTMGHDVGDALLKMVADRLLQAVRRCEL 342
           + RL+ A++L  R    GA+L +DLD FK +ND++GH  GD LL  VA+RL   +R  + 
Sbjct: 230 LARLEHALSLSAREGGSGAVLFLDLDRFKDVNDSLGHPTGDRLLCAVAERLRPCLRESDT 289

Query: 343 VARLGGDEFVIVMENLGIDERGAALKAKSVGQKVRGLLNDPFMLAGK-QLRTSPSIGIAL 401
           +ARLGGDEF++++E     ER A +  K + Q     L  PF L  + ++    SIGI L
Sbjct: 290 LARLGGDEFLLLLETAATPERAAVVAEKLLEQ-----LAAPFRLDDRSEVYVGASIGICL 344

Query: 402 FAEGRPGLEELLKQADVAMYQAKEAGKNALRFFDPAMQAAVEERVALENDLRNGVLENEF 461
           +         L++ AD A+YQAK AG++  RF+  A     + R+ALE  LR G+ + EF
Sbjct: 345 YPADGDNATTLIQHADSALYQAKAAGRHTFRFYSEAQTRQADARLALEAALRRGLEKEEF 404

Query: 462 RLFCQPQVDA-CGRLCGGEVLIRWQHPVRGLVMPNQFIPLAEQTDLIIPIGEWVLRKTCE 520
            L+ QPQVD     L G E L+RW+ P   LV P +FIPLAE+T LI+P+GEWVLR+ C 
Sbjct: 405 LLYYQPQVDLRTASLEGVEALVRWRLPGGELVPPARFIPLAEETGLILPLGEWVLRQACR 464

Query: 521 TLVEWESHPSLAQISLSVNVSVNQVRDHNFVERVLAIIDDCGANPARIMLELTESLMAEN 580
            + +W +   L    ++VN+S  Q R  + ++R+ AI+ + G  P  + LE+TESL+ +N
Sbjct: 465 QMQQWVAR-GLPIRRVAVNLSSRQFRQADLLQRINAILAETGLAPRYLELEITESLLMDN 523

Query: 581 VEEIILKMNALRVRGVRFSVDDFGTGYSSLSYLKRFPLSELKIDQSFVREIALNQHDAVI 640
             ++  K+ AL   G+R ++DDFGTGYSSLSYLKRFPL  LK+D+SF+R+IA +   + I
Sbjct: 524 SAQVDAKLEALEAMGIRLAIDDFGTGYSSLSYLKRFPLHTLKLDRSFIRDIADDPVSSNI 583

Query: 641 TEIIITLAKKLGLGVLAEGVETEDQLNFLLAHDCSYFQGYLFGKPCAIE 689
              II L + L + +LAEGVET+ Q   LL + C   QGYLF  P   E
Sbjct: 584 VASIIELGQHLDMDILAEGVETDQQRGILLQNGCRTCQGYLFSHPLPAE 632