Pairwise Alignments

Query, 709 a.a., signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 959 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  367 bits (941), Expect = e-105
 Identities = 206/464 (44%), Positives = 281/464 (60%), Gaps = 7/464 (1%)

Query: 223 KSGSYLPVLCRGVILRGADGTPLRMSGTNMDLTERKESEARIYQLAYYDVLTGLANRTLL 282
           K GS  P       +R   G          D+TERK +EA++  LA YD LT L NR LL
Sbjct: 481 KDGSLYPEWLNISSVRDEGGQASHYIAAFSDITERKAAEAQVRHLAEYDALTNLPNRVLL 540

Query: 283 MERLKAAIALCERSKQIGALLIIDLDNFKILNDTMGHDVGDALLKMVADRLLQAVRRCEL 342
            +RL  AIA   R+    ALL +DLD FK +ND++GH VGD +L  V +RLL AVR  + 
Sbjct: 541 QDRLGQAIAAARRAGSCLALLFLDLDRFKNINDSLGHTVGDQVLCQVGERLLTAVRASDT 600

Query: 343 VARLGGDEFVIVMENLGIDERGAALKAKSVGQKVRGLLNDPFMLAGKQLRTSPSIGIALF 402
           V+RLGGDEFV+++  L      +  +A SV +K+   L  P  +   +L  +PSIGIA+F
Sbjct: 601 VSRLGGDEFVLLLPQLE-----SPAQAASVAEKLLLTLATPLAIDDYELAVTPSIGIAVF 655

Query: 403 AEGRPGLEELLKQADVAMYQAKEAGKNALRFFDPAMQAAVEERVALENDLRNGVLENEFR 462
            E     + LLK AD AMY AKE+G+N  ++F  AM A V +R+ LEN+LR  +   E  
Sbjct: 656 PEDGEDGDTLLKNADAAMYVAKESGRNNYQYFTAAMNARVSQRLLLENNLRQALARQELA 715

Query: 463 LFCQPQVDA-CGRLCGGEVLIRWQHPVRGLVMPNQFIPLAEQTDLIIPIGEWVLRKTCET 521
           L  QPQ D   G L G E L+RW+ P +GL+ P++FIP+AE+T LI+PIG+WVLR+ C  
Sbjct: 716 LHYQPQYDLHSGTLVGCEALLRWRQPEQGLIPPDRFIPVAEETGLILPIGQWVLREACRQ 775

Query: 522 LVEWESHPSLAQISLSVNVSVNQVRDHNFVERVLAIIDDCGANPARIMLELTESLMAENV 581
              W+    L  + ++VN+S  Q R  N    V   +   G +P  + LELTES++ E+ 
Sbjct: 776 AQAWQD-AGLPPLVVAVNISAVQFRQANLAALVQEALAASGLSPCWLELELTESMLMEDG 834

Query: 582 EEIILKMNALRVRGVRFSVDDFGTGYSSLSYLKRFPLSELKIDQSFVREIALNQHDAVIT 641
           E     +  L+  G+R ++DDFGTGYSSL+YLKRF L +LKID+SF+R++  +  DA IT
Sbjct: 835 ERHTQTLAQLKAMGIRLALDDFGTGYSSLAYLKRFSLDKLKIDRSFIRDLPQDAEDAAIT 894

Query: 642 EIIITLAKKLGLGVLAEGVETEDQLNFLLAHDCSYFQGYLFGKP 685
             II +A+ LGL  LAEGVETE Q +FL    C+  QG+L  +P
Sbjct: 895 TAIIGMARDLGLETLAEGVETEQQWSFLAERGCAQMQGFLRARP 938