Pairwise Alignments
Query, 709 a.a., signal transduction protein (RefSeq) from Shewanella amazonensis SB2B
Subject, 1281 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS
Score = 355 bits (911), Expect = e-102
Identities = 243/697 (34%), Positives = 363/697 (52%), Gaps = 52/697 (7%)
Query: 6 LFSDLIEYIPVGIVVHGPQSEILYANDRASEILGL-STAQMLGKVDIDPAWRFDFPDGTP 64
+ +++E +P G+ ++ P+ ++ N+R +L L T G ++ RF+ G
Sbjct: 602 ILQNILENLPDGVSLYDPEQRMIACNERFRTLLDLPDTLFAQGYPTLEDMVRFNARRG-- 659
Query: 65 MSLADY-PVNRVLKCKEGVWGMILKVHRPVAKDVAWVLCNAFPSIGE--DGEVLQV---- 117
+Y P + + + G++ + RP N + E DG VL++
Sbjct: 660 ----EYGPGDEERRTR----GVLRALQRP----------NNTAVLRERPDGTVLEIRQVN 701
Query: 118 ------ITCFTDISALKHAEEALKASEERLNLMLQGANDAAWDWDLRQHTVYYSPRWWQM 171
I +TDI+A AE LK +E+ + + +A D + + + +
Sbjct: 702 LGDGSTIIIYTDITARHRAEAELKLAEK----VFANSPEAIMICDQGNRIISVNRAFCDI 757
Query: 172 IGREPDE-LEPTEDLWVKLLHPDDYQKVMDKMNGLFDRSGPSSFDTEFRLQTKSGSYLPV 230
G +E L + H D+ + M ++ ++ E + K+G P
Sbjct: 758 TGYAQEEVLGQDPRMLASGRHDKDFYRQMWEI-----LRDTGAWAGEIWDRRKNGEIYPK 812
Query: 231 -LCRGVILRGADGTPLRMSGTNMDLTERKESEARIYQLAYYDVLTGLANRTLLMERLKAA 289
+ + G D+TERKE+EARI+ LA++D LTGL NR L RL+ +
Sbjct: 813 WMTINAVHDTQSGALTHYITLFSDITERKETEARIHHLAHHDPLTGLPNRFTLEARLEQS 872
Query: 290 IALCERSKQIGALLIIDLDNFKILNDTMGHDVGDALLKMVADRLLQAVRRCELVARLGGD 349
+A R A++ +DLD FK +ND++GH VGD+LL +A RL AVR + VARLGGD
Sbjct: 873 LADARRHGHKVAVMFMDLDRFKTINDSLGHAVGDSLLMEIAHRLRSAVRESDTVARLGGD 932
Query: 350 EFVIVMENLGIDERGAALKAKSVGQKVRGLLNDPFMLAGKQLRTSPSIGIALFAEGRPGL 409
EFV+V+ ++ A + K + R L + +L TS SIGI+L+ + +
Sbjct: 933 EFVVVLPDVEGANDAAHVAGKIIEDVARSL-----RVGAHELHTSASIGISLYPDDGETV 987
Query: 410 EELLKQADVAMYQAKEAGKNALRFFDPAMQAAVEERVALENDLRNGVLENEFRLFCQPQV 469
+++ AD AMY AK G+N +FF AM A ER+ LE LR ++ +E L QPQ
Sbjct: 988 PTVMQNADTAMYHAKAIGRNNFQFFASAMNRAATERLELERKLRQAMVNDELELHFQPQF 1047
Query: 470 D-ACGRLCGGEVLIRWQHPVRGLVMPNQFIPLAEQTDLIIPIGEWVLRKTCETLVEWESH 528
A R+ G E L+RW+HP GL+ P++FIP+AE+T LI+ IG+WVL+ C L W
Sbjct: 1048 ALAADRVTGVEALLRWRHPEDGLIPPDRFIPIAEETGLIVGIGDWVLQAACRQLKAWLDQ 1107
Query: 529 PSLAQISLSVNVSVNQVRDHNFVERVLAIIDDCGANPARIMLELTESLMAENVEEIILKM 588
L + ++VN+S Q+++ F RV AI+ + G + LE+TES + E EE I +
Sbjct: 1108 -GLPPLRMAVNLSTRQLKEKEFPSRVAAILQETGLPAVLLELEITESGVMERPEEAITTL 1166
Query: 589 NALRVRGVRFSVDDFGTGYSSLSYLKRFPLSELKIDQSFVREIALNQHDAVITEIIITLA 648
AL GV ++DDFGTGYSSLSYLK FP+ LKID+SFVR+I + DA I I LA
Sbjct: 1167 QALNDMGVTLAIDDFGTGYSSLSYLKLFPIDRLKIDRSFVRDIERDPDDAAIARGTIALA 1226
Query: 649 KKLGLGVLAEGVETEDQLNFLLAHDCSYFQGYLFGKP 685
LGL V+AEGVET QL+ L A C QGY F +P
Sbjct: 1227 HSLGLEVVAEGVETSAQLDMLAADGCDEVQGYFFSRP 1263
Score = 63.5 bits (153), Expect = 6e-14
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Query: 130 AEEALKASEERLNLMLQGANDAAWDWDLRQHTVYYSPRWWQMIGREPDELEPTEDLWVKL 189
A E L+ +++RL + + +W+ DLR ++ S ++++G +P E T +++L
Sbjct: 334 AAEELQRTQDRLLEAQRIGHIGSWERDLRSGRLWCSEEAYRLVGLDPSE-PLTYAHFLEL 392
Query: 190 LHPDDYQKVMDKMNGLFDRSGPSSFDTEFRLQTKSGSYLPVLCRGVILRGADGTPLRMSG 249
+HP+D KV + + + +F E+R+ + G + RG + A G PLR SG
Sbjct: 393 VHPEDRDKVQQATD--HNAAKEETFAVEYRVLLQDGRLRHFINRGRLFWDARGQPLRASG 450
Query: 250 TNMDLTERKESE 261
T D+TERK +E
Sbjct: 451 TTQDITERKLAE 462
Score = 37.4 bits (85), Expect = 5e-06
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 18/177 (10%)
Query: 10 LIEYIPVGIVVHGPQSEILYANDRASEILGLSTAQMLGKVDID-----PAWRFDFPDGTP 64
+++ +P GI V + N+ E+LGL + V + PA R ++ G P
Sbjct: 475 VLQNMPQGISVFDEHLRLQLWNEGMREVLGLPAEALYRGVPFEDLVRYPAQRGEYGPGDP 534
Query: 65 MSLADYPVNRVLKCKEGVWGMILKVHR--PVAKDVAWVLCNAFPSIGEDGEVLQVITCFT 122
+ M K HR D L P + +DG++ IT +T
Sbjct: 535 EQHVQ---------ERKALAMQFKPHRFERTRLDGRTTLVQGEP-LFDDGQLTGFITTYT 584
Query: 123 DISALKHAEEALKASEERLNLMLQGANDAAWDWDLRQHTVYYSPRWWQMIGREPDEL 179
DIS K E+AL+ L +L+ D +D Q + + R+ ++ PD L
Sbjct: 585 DISESKRNEQALRNQNAILQNILENLPDGVSLYDPEQRMIACNERFRTLLDL-PDTL 640