Pairwise Alignments

Query, 709 a.a., signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 972 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  365 bits (937), Expect = e-105
 Identities = 249/676 (36%), Positives = 351/676 (51%), Gaps = 32/676 (4%)

Query: 17  GIVVHGPQSEILYANDRASEILGLSTAQMLGKVDIDPAWRFDFPDGTPMSLADYPVNRVL 76
           GI+       I +AN RA  +LG +   +LG+      W    P   P  ++   + R L
Sbjct: 300 GILALDRGGRITFANQRAEALLGAAPGGLLGRDAATVLW----PGAAPAEVSG--LARAL 353

Query: 77  KCKEGVWGMILKVHRPVAKDVAWVLCNAFPSIGEDGEVLQV--ITCFTDISALKHAEEAL 134
                  G    V    +     VL    P  G +G+  Q   +  F DIS +K AE  L
Sbjct: 354 ATGAVFEGEDDFVRSDGSAFPVAVL--GAPLRGGEGDADQAGYVASFRDISEIKQAEARL 411

Query: 135 KASEERLNLMLQGANDAAWDWDLRQHTVYYSPRWWQMIGREPDELE---PTEDLWVKLLH 191
             +      +     +A    D R      +P + ++ G    +     P   L      
Sbjct: 412 HLAAR----VFDSLGEAMVVTDARGRIQSVNPAFSEVTGYSEADARGRAPGHILASGQHD 467

Query: 192 PDDYQKVMDKMNGLFDRSGPSSFDTEFRLQTKSGSYLPVLCRGVILRGADGTPLRMSGTN 251
           P  Y ++   +           +  E   + KSG   P       ++   G   +  G  
Sbjct: 468 PAFYAQMWQSLQE------QGKWQGEVINRRKSGETYPEWLSITAIKDGAGQVSQYVGLF 521

Query: 252 MDLTERKESEARIYQLAYYDVLTGLANRTLLMERLKAAIALCERSKQIGALLIIDLDNFK 311
            D+T+RK++EA I+ LAY+D LTGL NR L  +RL+ A+    RS++  A+L++DLD FK
Sbjct: 522 TDITDRKQAEAHIHHLAYHDPLTGLPNRRLFYDRLENALRQAHRSRRKLAVLLLDLDRFK 581

Query: 312 ILNDTMGHDVGDALLKMVADRLLQAVRRCELVARLGGDEFVIVMENLGIDERGAALKAKS 371
            +NDT+GHD GD LLK V  RL   +R  + +ARLGGDEFV+++  +   E  + +  K 
Sbjct: 582 AVNDTLGHDQGDLLLKEVGARLSLCLREGDTLARLGGDEFVLLLPEVLSAEDASIVAGKL 641

Query: 372 VGQKVRGLLNDPFMLAGKQLRTSPSIGIALF-AEGRPGLEELLKQADVAMYQAKEAGKNA 430
           + Q      + P  L  +++  S SIGIAL+ A+G  G E LLK ADVAMY AK+ G+ A
Sbjct: 642 LAQ-----FDQPVRLGEREIFASTSIGIALYPADGEDG-ESLLKHADVAMYAAKDGGRAA 695

Query: 431 LRFFDPAMQAAVEERVALENDLRNGVLENEFRLFCQPQVDAC-GRLCGGEVLIRWQHPVR 489
            RFF  +      ER+ LENDLR  V   +  L+ QPQ+ A  GR+ G E L+RW+HP R
Sbjct: 696 YRFFIASHNERSLERLELENDLRRAVEGEQLLLYYQPQIGASSGRIAGVEALVRWRHPTR 755

Query: 490 GLVMPNQFIPLAEQTDLIIPIGEWVLRKTCETLVEWESHPSLAQISLSVNVSVNQVRDHN 549
           GLVMP+ FI LAE   LI  IG W L   C  L  W+    +    ++VNVS  Q+R  +
Sbjct: 756 GLVMPDSFIALAENAGLIDAIGHWCLVAACRQLRAWQEQ-GVPVPRVAVNVSARQLRRWD 814

Query: 550 FVERVLAIIDDCGANPARIMLELTESLMAENVEEIILKMNALRVRGVRFSVDDFGTGYSS 609
           F + VL ++   G +PA + LELTES +A++ E+I+   + LR  GVR S+DDFGTGYSS
Sbjct: 815 FAQEVLQVVTQSGIDPAGLELELTESSLADDPEQILAIFSTLRQAGVRVSIDDFGTGYSS 874

Query: 610 LSYLKRFPLSELKIDQSFVREIALNQHDAVITEIIITLAKKLGLGVLAEGVETEDQLNFL 669
           LSYL R+P+ E+KID+SFV  +  ++    +   +I LA  LG+  +AEGVETE Q   L
Sbjct: 875 LSYLSRYPVDEVKIDRSFVSRLLDDREARSVVRAVILLAHGLGMRTVAEGVETEAQWQVL 934

Query: 670 LAHDCSYFQGYLFGKP 685
              DC   QGYLF KP
Sbjct: 935 SDLDCDELQGYLFSKP 950