Pairwise Alignments

Query, 709 a.a., signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 1037 a.a., diguanylate phosphodiesterase from Burkholderia phytofirmans PsJN

 Score =  464 bits (1195), Expect = e-135
 Identities = 274/638 (42%), Positives = 388/638 (60%), Gaps = 23/638 (3%)

Query: 62   GTPMSLADYP--VNRVLKCKEGVWGMILKVHRPVAKD--VAWVLCNAFPSIGEDGEVLQV 117
            GT +  AD P       K  +G+ G  L+  R V KD  + W+  +  P     GE +  
Sbjct: 398  GTVIYPADIPRVAPEFQKALQGLRGDDLEF-RCVRKDGSLMWLSASWVPITDSKGEFIGF 456

Query: 118  ITCFTDISALKHAEEALKASEERLNLMLQGANDAAWDWDLRQHTVYYSPRWW---QMIGR 174
             T   DI+  K  E  L+ +    + M       A    LR ++ +     +   +++G+
Sbjct: 457  RTSGRDITERKQVEAELRIAAVAFDSMEPMMITDASATILRVNSAFTECTGYTAEEIVGQ 516

Query: 175  EPDELEPTEDLWVKLLHPDDY-QKVMDKMNGLFDRSGPSSFDTEFRLQTKSGSYLPVLCR 233
             P  L           H D + Q++ ++++      G      E   + K+G   P    
Sbjct: 517  TPRVLRSGR-------HDDAFFQEMWEEIHSAGGWQG------EVWDRRKNGEVYPKWLT 563

Query: 234  GVILRGADGTPLRMSGTNMDLTERKESEARIYQLAYYDVLTGLANRTLLMERLKAAIALC 293
               +   +GT     GT+ D+TERK +E RI +LA++D LT L NRTLL++RL+ AI   
Sbjct: 564  ISAVMSDNGTVSHYVGTHHDITERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITAS 623

Query: 294  ERSKQIGALLIIDLDNFKILNDTMGHDVGDALLKMVADRLLQAVRRCELVARLGGDEFVI 353
             R++  GALL IDLD+FK LNDT+GHD GD LL+ VA RL  +V   + VAR+GGDEFV+
Sbjct: 624  ARNEACGALLFIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGDEFVV 683

Query: 354  VMENLGIDERGAALKAKSVGQKVRGLLNDPFMLAGKQLRTSPSIGIALFAEGRPGLEELL 413
            V+ NL  + + AA + ++VG+++  +L  P+ L   + RTS SIG  +F   +  ++ELL
Sbjct: 684  VLGNLHKNRQEAANQTEAVGERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASIDELL 743

Query: 414  KQADVAMYQAKEAGKNALRFFDPAMQAAVEERVALENDLRNGVLENEFRLFCQPQVDACG 473
            KQAD+AMY++KE G+NA+RFFDP MQ  V +R ALE  LRN + +N+F L  Q QV    
Sbjct: 744  KQADLAMYKSKERGRNAVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQVVGT- 802

Query: 474  RLCGGEVLIRWQHPVRGLVMPNQFIPLAEQTDLIIPIGEWVLRKTCETLVEWESHPSLAQ 533
            R+ G E L+RWQHP RG+V P +FIPLAE+T LI+ +G WVL   C  L  W + P +A 
Sbjct: 803  RVTGAEALVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAH 862

Query: 534  ISLSVNVSVNQVRDHNFVERVLAIIDDCGANPARIMLELTESLMAENVEEIILKMNALRV 593
            ++++VNVSV Q R  +FV+ VL II   GA P R+ LELTES++ +NV++II KM+AL+ 
Sbjct: 863  LTIAVNVSVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKA 922

Query: 594  RGVRFSVDDFGTGYSSLSYLKRFPLSELKIDQSFVREIALNQHDAVITEIIITLAKKLGL 653
            +G+ F++DDFG GYSSLSYLKR PL +LKID+SFVR++ ++ +DAVI   I+ LA+ LGL
Sbjct: 923  KGIVFALDDFGIGYSSLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGL 982

Query: 654  GVLAEGVETEDQLNFLLAHDCSYFQGYLFGKPCAIELF 691
            GV+AEGVETE Q +FL A  C  +QGY F +P  IE F
Sbjct: 983  GVIAEGVETEAQRDFLAAAGCYAYQGYYFCRPLPIEDF 1020



 Score = 34.7 bits (78), Expect = 2e-05
 Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 12/136 (8%)

Query: 134 LKASEERLNLMLQGANDAAWDWDLRQHTVYYSPRWWQM-----IGREPDELEPTEDLWVK 188
           L+ +EE+   +     D   +W++   T    PRW        IG   DE     D    
Sbjct: 345 LRENEEKFRAIA----DCTVNWEIWWGTDG-KPRWINSAVEAYIGYTVDECMALPDFAGT 399

Query: 189 LLHPDDYQKVMDKMNGLFDRSGPSSFDTEFRLQTKSGSYLPVLCRGVILRGADGTPLRMS 248
           +++P D  +V  +        G    D EFR   K GS + +    V +  + G  +   
Sbjct: 400 VIYPADIPRVAPEFQKALQ--GLRGDDLEFRCVRKDGSLMWLSASWVPITDSKGEFIGFR 457

Query: 249 GTNMDLTERKESEARI 264
            +  D+TERK+ EA +
Sbjct: 458 TSGRDITERKQVEAEL 473