Pairwise Alignments

Query, 709 a.a., signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 1228 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  347 bits (891), Expect = 2e-99
 Identities = 198/468 (42%), Positives = 278/468 (59%), Gaps = 8/468 (1%)

Query: 223  KSGSYLPVLCRGVILRGADGTPLRMSGTNMDLTERKESEARIYQLAYYDVLTGLANRTLL 282
            K G   P      I+R   G      G+  D++ERK +E RI+ LA++D LT L NR  L
Sbjct: 758  KEGFDFPKWLMMSIVRDETGAISHYIGSFTDISERKVNEERIHFLAHHDSLTLLPNRLSL 817

Query: 283  MERLKAAIALCERSKQIGALLIIDLDNFKILNDTMGHDVGDALLKMVADRLLQAVRRCEL 342
              RL+        S+   A++ ID+D+FK +NDT+GH VGD LL  VA RL   +   ++
Sbjct: 818  QSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDDI 877

Query: 343  VARLGGDEFVIVMENLGIDERGAALKAKSVGQKVRGLLNDPFMLAGKQLRTSPSIGIALF 402
            VARLGGDEFV+V+ +   D      +   V + +R  LN  +++  K L +SPSIGI+LF
Sbjct: 878  VARLGGDEFVVVLSDTDHD------RVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLF 931

Query: 403  AEGRPGLEELLKQADVAMYQAKEAGKNALRFFDPAMQAAVEERVALENDLRNGVLENEFR 462
                  +E L+K AD+AMY+AK AG+N  +FF  AM   V ER  +E  LR  +  NE  
Sbjct: 932  PTDGDSVEALMKNADMAMYRAKAAGRNNYQFFTAAMNTLVTERQQIETGLRQAIACNELL 991

Query: 463  LFCQPQVD-ACGRLCGGEVLIRWQHPVRGLVMPNQFIPLAEQTDLIIPIGEWVLRKTCET 521
            L+ QPQVD + G++ G E LIRWQHP  GLV P++FIP+AE+ D+IIPIG+WVL      
Sbjct: 992  LYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQ 1051

Query: 522  LVEWESHPSLAQISLSVNVSVNQVRDHNFVERVLAIIDDCGANPARIMLELTESLMAENV 581
            L EW    +   + ++VN+S +Q+R    V  ++ ++         + LE+TES+  +  
Sbjct: 1052 LAEWRDKGAKG-LRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYP 1110

Query: 582  EEIILKMNALRVRGVRFSVDDFGTGYSSLSYLKRFPLSELKIDQSFVREIALNQHDAVIT 641
            E+    +  LR  G+  ++DDFGTGYSSLSYLK  PL  LK+D+SFV++I  + +DA I+
Sbjct: 1111 EQNAKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAIS 1170

Query: 642  EIIITLAKKLGLGVLAEGVETEDQLNFLLAHDCSYFQGYLFGKPCAIE 689
               I++A +LGL V+AEGVE E QL  L    C   QGY F KP A +
Sbjct: 1171 AATISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAAD 1218