Pairwise Alignments

Query, 602 a.a., sigma-54 dependent transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

Subject, 673 a.a., Fis family transcriptional regulator from Cupriavidus basilensis FW507-4G11

 Score =  260 bits (664), Expect = 1e-73
 Identities = 199/634 (31%), Positives = 311/634 (49%), Gaps = 64/634 (10%)

Query: 11  DSWRR------SEGAGLSETRPGELKLSRVELDERCERHRQLIALVESEALPLFTR---L 61
           DSWRR        GAG +        L    L  R E++ +L+    S +LPL  +    
Sbjct: 44  DSWRRCLVGQVDPGAGAAPP-----PLDEAGLRVRREKNDRLV----SASLPLIQQTREF 94

Query: 62  MAHTDSRLILSDAEGFVLRHWGLSRYSDRLANVALDCGVNWLEEHKGTNAIGTALRAKEA 121
           ++ T + ++L+D +G +L+  G     +    V L  G +W E + GTNAIGTAL  ++ 
Sbjct: 95  LSQTGTIMLLADPDGMILQQEGDMHIVEPAGEVGLIPGCDWTELNCGTNAIGTALALQQP 154

Query: 122 LSVVGEQHFCRPHRFMSCTASPIFSP-SGELIGALDITSERLKHNQQTLLLISSLAQQVE 180
           + + G +HFC   +  +C+A+ I  P  G ++G +D++     +++ +L L  SLA ++E
Sbjct: 155 VQIHGAEHFCAGIKRWTCSATVIRDPLDGGVLGVIDVSGLAQTYSRHSLALTVSLAGRIE 214

Query: 181 TALLCSLPGGRFRVDLAASRQLLSSGWQGILIADDEGRLLGLNPMARQYLG--GAS---- 234
           + L       R R+         S    G+L+ D+ GRL+  NP A   L   G S    
Sbjct: 215 SRLAKLAMERRLRLLDRCMSHFASVRSDGVLVLDEGGRLVKANPQAPSALARLGVSTILN 274

Query: 235 -----PGM-----QLGELLGDDW-RAQQAQCLRGE---------LHLATSAIGEGALWIQ 274
                PG+     + G     +W R  + + +R           +  A      GA    
Sbjct: 275 SAFSIPGLDARVARAGSAPLPEWLRLTRFEAIRDSGDMLGFVVVIPAAPHRPASGAAGAP 334

Query: 275 TNKASSLHGVKPLRFHDPQLETAWQQARKVVSRKIPLLVQGETGVGKEHFVRQLYQDSRL 334
             +  +      +  +   L +A ++A+ +   K+P+L+ GETGVGKE F + ++Q S  
Sbjct: 335 AARLGAAPAFSSIVGNGVALRSAVEKAQHLAPSKVPVLLLGETGVGKELFAQGIHQASAC 394

Query: 335 -DGELVAVNCAALPTELIEAELFGYQGGAFTGASRQGHLGKVRQADGGFLFLDEIGELPL 393
            DG  VA+NC  L  +L+ +ELFGY  GAFTGA R G  GK+  A+ G LFLDEIGE+PL
Sbjct: 395 ADGPFVALNCGGLSRDLLASELFGYAEGAFTGARRSGAAGKIEAANRGTLFLDEIGEMPL 454

Query: 394 AAQGRLLRVLQEREVTPVGGLKSHRVDIQVVAATHMDLAEMVRDGRFREDLYFRLNGLQV 453
             Q  LLRVL+E E+  +G     +V  ++VAATH +L + V  G+FR DL++R+    +
Sbjct: 455 DIQPHLLRVLEEGEIYRLGENTPRKVSFRLVAATHRNLRDDVAAGKFRMDLFYRIAVTNI 514

Query: 454 SLPPLRQRADK-----SRLIHKLHRQYRVNPPG--DEQRLCPQLLALLEAYAWPGNLREL 506
           ++PPLR+R D      +  + +L  +Y V      DE   C      L AY WPGN+REL
Sbjct: 515 AIPPLRERKDDIPALVTHWLGRLCERYGVPVASFDDEAYRC------LLAYDWPGNVREL 568

Query: 507 DNLMQVACLMAEGERELSQAHLSDAHRRALMQARPFYSGRMNS-ESSQSSAESSLKAELD 565
            N ++ + LMAEG        L            P  +GR      S      SL+    
Sbjct: 569 RNALEGSLLMAEG----GVITLDKLPLEISAVGMPGGAGRAKDIAGSVPEPVCSLEMAES 624

Query: 566 GRIQNTLADCDGNISEAARRLGVSRNLIYRSLKR 599
             I+  LA   GN++  A RLG++++ +Y+ +++
Sbjct: 625 DSIRKALAYSGGNLTRTASRLGIAKSTLYQKIRK 658