Pairwise Alignments

Query, 519 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 559 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  511 bits (1316), Expect = e-149
 Identities = 265/512 (51%), Positives = 343/512 (66%), Gaps = 13/512 (2%)

Query: 1   MKETFFRTMTWLHTWAGLLVCWVLLLVFFAGTLSFFRHEISLYATPELHSQVLGSGVNTS 60
           MKETFFRT++WLHTWAGLLVCWVLLL+FFAG+LS+FRHEISL+A PELH           
Sbjct: 1   MKETFFRTLSWLHTWAGLLVCWVLLLIFFAGSLSYFRHEISLWAEPELHRGAFQDYQANQ 60

Query: 61  LEQNLRQGQAYLSARVP-DAPDWYIALPQERQPYLAFQWSEPRDK-QRPLIHSQPITL-- 116
           +   L +GQ Y+    P +A  W I  P +R P L+F W  P +K QR     Q   L  
Sbjct: 61  VVSQLDKGQDYIENHSPAEAQRWLINFPTQRNPMLSFAWQLPPEKGQRRGKIEQHTALAD 120

Query: 117 SGELADEPRQTKGGDFFYRLHFDLHYISALTARYLVGICTMFMLIALITGVVIHKRIFKD 176
           S ++    R ++GGDFFYRLHFDLHY+ A+TARY+VG+CTMFMLIALI+G+VIHKRIFKD
Sbjct: 121 SSDMITHVRDSRGGDFFYRLHFDLHYMPAITARYIVGVCTMFMLIALISGIVIHKRIFKD 180

Query: 177 FFSFRPRKGSRSWLDAHNISAVMALPFHLTITYTGLITLMLMYMPWATLSVWNGDTKAMR 236
            FSFR  KG+RSWLDAHN+S+V+ALP+HL ITYTGLITLML+Y+PW   + +  D +A  
Sbjct: 181 LFSFRQNKGARSWLDAHNVSSVIALPYHLMITYTGLITLMLIYIPWTVSTAYPEDNQAFL 240

Query: 237 QELSPRFDQQKASGQPQDTLDLTLLLPQVNQLWGETAAVKNVRVQHPGDANARIFFTRDT 296
           +EL+P    +KASG   + + L+ LLP+V   WG+ A +K V V +P D N+++ F ++T
Sbjct: 241 KELNPARQTEKASGIKAEQVRLSQLLPRVQAQWGD-APIKQVTVSNPKDQNSQVTFYQNT 299

Query: 297 GQDITDERVQLIFDGVTGKLLNPGAHHATGSQQLHDTLMALHTARFAGWPLRILGFVMGL 356
           G+D+TDE   L+F GVTG+L     H  +G+   +DT+M+LHTARFA   LRIL F  GL
Sbjct: 300 GKDVTDESTLLVFSGVTGELKYASPHEVSGAVVTYDTMMSLHTARFAAPLLRILFFFCGL 359

Query: 357 MGCAMIASGCLLWATKLREKR--------KNTAGLKLVEGLNLAVIMGLPLGTVLFFYAN 408
           +GCAM+A+G L+WA +LR+K+        K   GL+LVEGLN   I+GLPLG V F YAN
Sbjct: 360 LGCAMVATGTLMWAIRLRQKQQKVIDKGEKAGLGLRLVEGLNFMFILGLPLGAVAFCYAN 419

Query: 409 RLLPAPAPGRAEDEVLAFFLGLLLCGVTALWRRDAAVWRALLGITALLALLMPVLNTLTS 468
           RLLPA    R+  EV +FF+ L   GV A   R    W+  L +   L   +P+LN LTS
Sbjct: 420 RLLPADFATRSAWEVHSFFIALCAMGVWAFIGRSRRHWQVALMLIGALYCALPILNALTS 479

Query: 469 PQGLVGNLLSNQWVLVSADLLFIVLGITCLFA 500
           P   + N+ S QW LV  D+  ++LG   LFA
Sbjct: 480 PSHFIDNIQSQQWALVGFDVFAVLLGAAMLFA 511