Pairwise Alignments

Query, 359 a.a., type IV pilus biogenesis protein PilM (RefSeq) from Shewanella amazonensis SB2B

Subject, 352 a.a., Type IV pilus biogenesis protein PilM from Xanthomonas campestris pv. campestris strain 8004

 Score =  252 bits (644), Expect = 9e-72
 Identities = 140/348 (40%), Positives = 214/348 (61%), Gaps = 2/348 (0%)

Query: 7   KRQAPQMVGIDIGSHEVKAILLSKTADGYKIVSHAAVPVKKGAVNDHDIRDAAAVVDCLR 66
           K Q+P ++G+DI S  VK + LS++ + +++  +A  P+   AV + +I +  AV + +R
Sbjct: 6   KSQSP-LIGVDISSTAVKLLQLSRSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIR 64

Query: 67  QLRRTLPKSCKFAAVAVSGSAVMTKVIYMDASLSEAEMEAQIEIEADNLIPYSLDEVSID 126
           +         K AA AV+GSAV+TK+I M A L ++++EAQ+E+EA N IPY ++EV++D
Sbjct: 65  RAINRSGSKAKNAAAAVAGSAVITKLIPMPADLDDSDLEAQVELEATNYIPYPIEEVNLD 124

Query: 127 FETLSVNSIDPSKVDVLLSACRTENIDARVDALDEVDLETKVVDIEGYALGRSAELIFGQ 186
           FE L      P  V VLL+A R+EN++ R  AL+   L  KV+D+E +A+  +  L+  +
Sbjct: 125 FEVLGPMPNSPDMVQVLLAASRSENVELRQSALELGGLVAKVMDVEAFAVENAFALVASE 184

Query: 187 LPEGASQKVVAMVDIGANMTTFAVVDQGETAFTREQAFGGEQFTQSILSFYGMSYEQAEK 246
           LP  A+  VVA+VDIGA MTT +V+  G + ++REQ FGG+Q T  ++  YG++YE+A  
Sbjct: 185 LPV-AADAVVALVDIGATMTTLSVLRSGRSLYSREQVFGGKQLTDEVMRRYGLTYEEAGL 243

Query: 247 AKVEGDLPRNYMFEVLSPFQTQLLQQIKRTLQIYCTSSGRDKVDYIVLCGGTSRLEGMAN 306
           AK +G LP +Y  EVL PF+   +QQI R LQ +   S  ++VD IVL GG + L  +  
Sbjct: 244 AKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLAGGCAALSRLPE 303

Query: 307 LLTNELGVHTIIADPLQGNLHADDSVKSTLQPSISKYMVACGLALRSY 354
           ++  +LGV T++A+PL             L       M+A GLALRS+
Sbjct: 304 MVEEQLGVTTVVANPLAQMTLGPKVQAHALALDAPALMIATGLALRSF 351