Pairwise Alignments

Query, 359 a.a., type IV pilus biogenesis protein PilM (RefSeq) from Shewanella amazonensis SB2B

Subject, 352 a.a., pilus assembly protein PilM from Dyella japonica UNC79MFTsu3.2

 Score =  257 bits (656), Expect = 4e-73
 Identities = 142/350 (40%), Positives = 212/350 (60%), Gaps = 1/350 (0%)

Query: 5   LWKRQAPQMVGIDIGSHEVKAILLSKTADGYKIVSHAAVPVKKGAVNDHDIRDAAAVVDC 64
           L+  + P ++G+DI S  VK + LS+    Y++  +A  P+   AV + +I +  AV + 
Sbjct: 3   LFTPKKPPLIGVDISSTAVKLLQLSQAGGRYRVEHYAVEPLPPNAVVEKNIVEVEAVGEA 62

Query: 65  LRQLRRTLPKSCKFAAVAVSGSAVMTKVIYMDASLSEAEMEAQIEIEADNLIPYSLDEVS 124
           +R+         K AA AV+GSAV+T++I M + LSE ++E QI++EA+  IPY ++EVS
Sbjct: 63  IRRAVARSGTKLKHAAAAVAGSAVITRIIPMSSDLSEEDLEGQIQVEANQYIPYPIEEVS 122

Query: 125 IDFETLSVNSIDPSKVDVLLSACRTENIDARVDALDEVDLETKVVDIEGYALGRSAELIF 184
           +DFE L     +P   +VLL+A RTEN+D RV ALD   +  KVVD+E +A+  +  ++ 
Sbjct: 123 LDFEVLGPVRDNPEMNNVLLAASRTENVDMRVAALDLGGIGAKVVDVEAFAMENAFSMVA 182

Query: 185 GQLPEGASQKVVAMVDIGANMTTFAVVDQGETAFTREQAFGGEQFTQSILSFYGMSYEQA 244
            QL  G    +VA+VDIGA MTT +V+    T ++REQ FGG+Q T  I+  YG+SYE+A
Sbjct: 183 DQLNVG-RDALVAVVDIGATMTTLSVLRNQRTIYSREQVFGGKQLTDEIMRRYGLSYEEA 241

Query: 245 EKAKVEGDLPRNYMFEVLSPFQTQLLQQIKRTLQIYCTSSGRDKVDYIVLCGGTSRLEGM 304
            +AK +G LP +Y  E L PF+  L+QQI R LQ +   S   KVD +VL GG + +EG+
Sbjct: 242 GRAKRKGGLPESYETEALEPFKESLIQQISRLLQFFFAGSEFSKVDQVVLAGGCASIEGL 301

Query: 305 ANLLTNELGVHTIIADPLQGNLHADDSVKSTLQPSISKYMVACGLALRSY 354
             +L  +LGV  ++A+PL     +       L       M+A GLA+RS+
Sbjct: 302 CPMLEEQLGVSCVVANPLARMSLSPRVQAQQLAQDAPALMIAVGLAMRSF 351