Pairwise Alignments

Query, 639 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

Subject, 1096 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2E3

 Score = 99.4 bits (246), Expect = 8e-25
 Identities = 108/423 (25%), Positives = 206/423 (48%), Gaps = 39/423 (9%)

Query: 240  DQVSGLPNRQYLVGRINSWLS----EPGSGALFMAKFDWLEEVHAKYGYQVRDETIKLLS 295
            D ++ LPNR  L+ R++  ++        GAL     D  + ++   G+ V D  +K+++
Sbjct: 668  DPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIIT 727

Query: 296  EKLQSQLEEIAPGVVARIAAFEFAFLVFDVD--KELISKYLQTLIRTVNQEISKA----G 349
             +L++ +       VAR+   EF  L+  ++  +  +S+ ++ L  T+ + +S+     G
Sbjct: 728  ARLEASVR--MEDTVARLGGDEFVVLLSGLEGTRNEVSEQVRELADTLRELLSEPMFLDG 785

Query: 350  GKPNEHFAIGIA--ERIGSMTVSDILAQSDNALQTAIKSGK----VYHWFESSEEQMFTR 403
             +     +IG+A     GS T +D+L ++D AL  A  SG+    ++H   + ++    R
Sbjct: 786  QRLQVTPSIGVALIPDHGS-TPTDLLKRADIALYRAKDSGRNATQMFH--NTMQKAASER 842

Query: 404  EQWREKLSSAINAKLFQFRWQP-IQLTDGAGLLQHEL--YCQLEIGDKLAHAGQFMPYVE 460
             +    L  A++   F  ++QP +   DG  +    L  +    +G++     +F+  +E
Sbjct: 843  LRMETDLRLALSRGEFSVQYQPQVDALDGRIIGAEALVRWRHPRLGEQ--SPSEFIKVLE 900

Query: 461  ----LLSLGA-LLDKCL--IQKVHDIHLLERNFEPVAINLTHQSLTDTDFHQWLQQFLRS 513
                +L +GA +LD+     +++ D  L++     + +N++ +     DF + ++Q L S
Sbjct: 901  DSGLILEVGAWILDETCQAFRQLIDRGLIDPLNFSLCVNISPRQFRQNDFVERIEQTLSS 960

Query: 514  TPLADRLC-FDIPESGVYSNPEACEALCAIIRDNGAKFGIDHFGRQFGSMSYLQTLRPSY 572
              L   L   ++ E  V  N +   +    ++  G  F +D FG  + S++YL+ L    
Sbjct: 961  HGLPYSLLKLEVTEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGYSSLTYLKRLPVDT 1020

Query: 573  VKLDQSF---AYYDENQHNAELCRALVNVARGLEIQVIVTGIQEKPQLDRFIPLKTTAYQ 629
            +K+DQSF   A  D N  +AE+ RA+V +AR LE+ VI  G++   QLD    L    YQ
Sbjct: 1021 LKIDQSFIRDATSDPN--DAEIIRAIVAMARSLELTVIAEGVETTEQLDFLQGLGCHLYQ 1078

Query: 630  GFI 632
            G++
Sbjct: 1079 GYL 1081