Pairwise Alignments

Query, 639 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

Subject, 856 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N1B4

 Score = 90.9 bits (224), Expect = 2e-22
 Identities = 98/429 (22%), Positives = 200/429 (46%), Gaps = 18/429 (4%)

Query: 224 SSLDEEVTA---LRKKNLVDQVSGLPNRQYLVGRINSWLS---EPGSGALFMAKFDWLEE 277
           S + +EV A   ++  ++ D ++GLPNR  L   +   L+   +  +  L M   D  + 
Sbjct: 414 SDITDEVAAHAQIQHLSMHDALTGLPNRNKLARYLEDALALKEQSTALTLLMIDLDNFKP 473

Query: 278 VHAKYGYQVRDETIKLLSEKLQSQLEEIAPGVVARIAAFEFAFLVFDVDKEL-ISKYLQT 336
           ++   G+   D  +  ++ +L+    +I   +VAR+   EF  ++  +D    I ++ + 
Sbjct: 474 INDSLGHPAGDAVLLEVAIRLRECTRDI--DLVARLGGDEFVLVLHGMDSHAEIDRFCER 531

Query: 337 LIRTVNQEISKAGGKPNEHFAIGIA--ERIGSMTVSDILAQSDNALQTAIKSGK-VYHWF 393
           L+ +++Q I       +   +IGIA   R G +   +++  +D AL  A  +GK  + +F
Sbjct: 532 LLDSLHQPIHYDHHTLHIGASIGIALSRRQGHLP-EELIRCADIALYQAKSNGKKTWCYF 590

Query: 394 ESS-EEQMFTREQWREKLSSAINAKLFQFRWQPIQLTDGAGLLQHELYCQLEIGDK-LAH 451
            +   +Q+  R Q    L  AI    F   +QP    DG  ++  E   + +   + L +
Sbjct: 591 AAHMNDQIQHRRQLESDLRQAIKNNEFVMHYQPRYHVDGKQIVSVEALLRWQHPVQGLLN 650

Query: 452 AGQFMPYVELLSLGALLDKCLIQKVHDIHLLERNFEPVAINLTHQSLTDTDFHQWLQQFL 511
              F+P  E   L   L + ++++  +  L       V++NL+      +D  + +++ L
Sbjct: 651 PDAFIPLAEQTDLIVPLGRWVLREACETALTWPGAMMVSVNLSPVQFARSDVIEDVREAL 710

Query: 512 RSTPL-ADRLCFDIPESGVYSNPEACEALCAIIRDNGAKFGIDHFGRQFGSMSYLQTLRP 570
             + L A RL  +I E+ +  + +   A    +++ G +  +D FG  + S+ YL+T   
Sbjct: 711 IQSRLPASRLELEITENVMLIDVDGALATMNALKELGVRLNMDDFGTGYSSLGYLRTYPF 770

Query: 571 SYVKLDQSF-AYYDENQHNAELCRALVNVARGLEIQVIVTGIQEKPQLDRFIPLKTTAYQ 629
             +K+D+ F A      ++  + +A++N+ + + + V   G++   QLD  I  +    Q
Sbjct: 771 DGIKIDKRFIASMSNGSNDRAVVQAIINLGKAMGLTVTAEGVETLEQLDFLISDQCHEVQ 830

Query: 630 GF-IAPPVN 637
           GF ++ PV+
Sbjct: 831 GFYLSRPVD 839