Pairwise Alignments

Query, 639 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

Subject, 646 a.a., Membrane bound c-di-GMP receptor LapD from Pseudomonas fluorescens FW300-N1B4

 Score =  184 bits (467), Expect = 1e-50
 Identities = 161/650 (24%), Positives = 305/650 (46%), Gaps = 22/650 (3%)

Query: 1   MTLFRQLYSLLFGLFLLVITALAYVQFTETKSFLTKQMESDLNNVSNSLGLLLVPALETG 60
           M+L +QL+  +    L+  +   +V    ++  +  Q+ S   + + +LGL L   ++  
Sbjct: 1   MSLRKQLFLAICLFLLVAFSGSFFVSLESSREQVLSQLRSHAQDAATALGLSLTAQID-- 58

Query: 61  DIATAETLINVIFEGGYYQQVKLTWLVDGKQQ-EWNNSLEIQGVPQWFINLGIFGTIKRE 119
           D A  E +++ IF+ GY+  +++  + + +   E +   +I+GVPQWF+++        +
Sbjct: 59  DPAMIELMVSSIFDSGYFSSIRVIDIENEQVLVERSAPAQIEGVPQWFVSVVNLRPQGGD 118

Query: 120 STITSGWLQLAQLEVTAHPGFGYHELWRILTNTIIVFSILFLVAIFLARFGLSWILKPLH 179
           + IT GW Q A++EV ++P F   +LW     ++I   I  L++     + L   L+PL 
Sbjct: 119 ALITRGWQQAARVEVLSNPQFALAKLWDSSLGSLIWLLICGLLSAVFGGWLLRRQLRPLD 178

Query: 180 IVSEHAKSIANRQFGPELAIPKTSELKEVVIAFNSMSSQLKQIFSSLDEEVTALRKKNLV 239
            + + A++I+ R+F     +P+T ELK VV+A N M  +LK +F+        LR ++  
Sbjct: 179 NMVKQAEAISKREFRSLPKLPRTPELKRVVLAMNQMVEKLKALFAEEAARSENLRAESYQ 238

Query: 240 DQVSGLPNRQYLVGRINSWL---SEPGSGALFMAKFDWLEEVHAKYGYQVRDETIKLLSE 296
           D ++GL NR+ L  ++   L    +   G L M + + L  ++ + G Q  D  I  + E
Sbjct: 239 DALTGLANRRLLDEQLADQLLVSEQSRDGHLLMLRINDLIGLNQRLGGQRTDALIGAVGE 298

Query: 297 KLQ--SQLEEIAPGVVARIAAFEFAFLVFDVDKELISKYLQTLIRTV-NQEISKAGG-KP 352
            L+  +Q  E    + AR    EF+ L   +D +  ++    +  T+ N  ++ A    P
Sbjct: 299 LLKRLTQPPERRTWLAARNRGGEFSLLTPGLDNKDAARVASEISATLENLRLTGASDCMP 358

Query: 353 NEHFAIGIAERIGSMTVSDILAQSDNALQTAIKSGKVYHWFESSEEQM--FTREQWREKL 410
             H  +G+         S++L + D AL  A +  +    +++  +     ++  WR  +
Sbjct: 359 VAH--LGVVAYHPGEPASEVLLRLDQALTQARQHPERPWVYQAHADTAPNHSQHDWRSWI 416

Query: 411 SSAINAKLFQFRWQP-IQLTDGAGLLQHELYCQ-LEIGDKLAHAGQFMPYVELLSLGALL 468
             A+     Q  +QP +Q  D + +L H++  + L+   +   AG F+P++E L   A  
Sbjct: 417 DEALTEGKMQLYFQPVVQCADTSQVLHHKVLARLLDPQGEAIVAGHFLPWIERLGWSARF 476

Query: 469 DKCLIQKVHDIHLLERNFEPVAINLTHQSLTDTDFHQWLQQFLRSTP-LADRLCFDIPES 527
           D  +++    +  L  N  P+A++L+  +L D    Q +   L S P LA  L  +I E 
Sbjct: 477 DLAMLETT--LEYLAANRWPLALSLSGSTLRDQAQLQQILDLLESLPELAPLLILEIDER 534

Query: 528 GVYSNPEACEALCAIIRDNGAKFGIDHFGRQFGSMSYLQTLRPSYVKLDQSFAY-YDENQ 586
            +   PE  + L   + + G + G+ HFG  F  +  L  L  +Y+K+D ++    DE  
Sbjct: 535 QL-PPPEELQRLSHSLLNTGYRIGLQHFGGSFSQIGNLTQLGLAYLKIDGAYIRGIDEQT 593

Query: 587 HNAELCRALVNVARGLEIQVIVTGIQEKPQLDRFIPLKTTAYQG-FIAPP 635
                  A+      +++ +I   ++ + +L+    L      G  I PP
Sbjct: 594 DKRLFIEAIFRATNSIDLPLIAEMVETQGELEVIRELGLFGVMGRLIGPP 643