Pairwise Alignments

Query, 639 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

Subject, 648 a.a., Membrane bound c-di-GMP receptor LapD from Pseudomonas fluorescens FW300-N1B4

 Score =  186 bits (471), Expect = 4e-51
 Identities = 156/631 (24%), Positives = 287/631 (45%), Gaps = 20/631 (3%)

Query: 1   MTLFRQLYSLLFGLFLLVITALAYVQFTETKSFLTKQMESDLNNVSNSLGLLLVPALETG 60
           M+LF+QL   +    ++  T    V    +++    Q+ S   + + +L L L P ++  
Sbjct: 1   MSLFKQLLIAICLFLVVAFTGSFMVSLESSRTQYVNQLRSHAQDAATALALSLTPNID-- 58

Query: 61  DIATAETLINVIFEGGYYQQVKLTWLVDGKQ-QEWNNSLEIQGVPQWFINLGIFGTIKRE 119
           D A  E L++ IF+ GYY  +++  L + K   E +    +  VP WF+ L        +
Sbjct: 59  DPAMVELLVSSIFDSGYYASIRVVDLANDKTIVERSGIPAVTNVPDWFVKLIGLEPAGGD 118

Query: 120 STITSGWLQLAQLEVTAHPGFGYHELWRILTNTIIVFSILFLVAIFLARFGLSWILKPLH 179
           + ++ GW Q A++EV +HP F   +LW+    ++    I   V+  L    L   LKPL 
Sbjct: 119 ALVSRGWEQAARVEVVSHPMFALAKLWQSALGSLGWLLICGAVSAVLGALLLRRQLKPLD 178

Query: 180 IVSEHAKSIANRQFGPELAIPKTSELKEVVIAFNSMSSQLKQIFSSLDEEVTALRKKNLV 239
            + + + +IA R+F     +P+T EL+ VV A N M  +LK +F    E    LR ++  
Sbjct: 179 YMVKQSHAIARREFLSLPELPRTPELRRVVQAMNQMVEKLKALFQEQAERSEKLRAESYQ 238

Query: 240 DQVSGLPNRQYLVGRINSWLS---EPGSGALFMAKFDWLEEVHAKYGYQVRDETIKLLSE 296
           D ++GL NR+Y   ++N+ +S   +  SG L + +   L  ++ + G Q  DE +K + E
Sbjct: 239 DNLTGLANRRYFEMQLNARVSNAEQASSGYLLLLRVKDLAGLNQRLGGQRTDELLKAVGE 298

Query: 297 KLQSQLEEI--APGVVARIAAFEFAFLVFDVDKELISKYLQTLIRTVNQEISKAGGKPNE 354
           +L  +  +      +V RI   EFA L   + +E   +    L   +    +        
Sbjct: 299 QLSRECAKYPETQNLVTRIRGGEFAVLAPGLVREEALQLASNLDSALASLHATGATDVAS 358

Query: 355 HFAIGIAERIGSMTVSDILAQSDNALQTAIKSGKVYHW----FESSEEQMFTREQWREKL 410
             +IG+A      +   ++  +D AL  A   G+   W      +S         W   L
Sbjct: 359 VASIGLAPFAHGDSPQAVIGLADQALAQAESQGEP-SWACLDHSASARVGDDHHAWHTLL 417

Query: 411 SSAINAKLFQFRWQPIQLTDGAGLLQH--ELYCQLEIGDKLAHAGQFMPYVELLSLGALL 468
             A++ + F+  +QP+  +    ++ H   L   L+  D+   AG+F+P++E     A L
Sbjct: 418 DQALDQQRFELYFQPVVASHDTQVVLHYKVLSRLLDEQDQTIPAGRFLPWLERFGWTARL 477

Query: 469 DKCLIQKVHDIHLLERNFEPVAINLTHQSLTDTDFHQWLQQFLRS-TPLADRLCFDIPES 527
           D+ +++ V  +  +  + E +A+NL+  +L D      + + LR  + L +RL  +I E 
Sbjct: 478 DRLMLELV--LEQMAEHEESLALNLSSATLADPQALNKVFEILRQHSNLGERLTLEIGEE 535

Query: 528 GVYSNPEACEALCAIIRDNGAKFGIDHFGRQFGSMSYLQTLRPSYVKLDQSF-AYYDENQ 586
            +       E L   +R+ G    +  FG +F  +  L  L  +Y+K+D S+    D+  
Sbjct: 536 QL-PEQAVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRAIDQES 594

Query: 587 HNAELCRALVNVARGLEIQVIVTGIQEKPQL 617
                  A+   A  +++ +I   ++ + +L
Sbjct: 595 DKRLFIEAIQRAAHSIDLPLIAERVETEGEL 625