Pairwise Alignments

Query, 639 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

Subject, 648 a.a., cyclic di-GMP receptor LapD from Pseudomonas sp. BP01

 Score =  180 bits (456), Expect = 2e-49
 Identities = 164/628 (26%), Positives = 293/628 (46%), Gaps = 24/628 (3%)

Query: 1   MTLFRQLYSLLFGLFLLVITALAY-VQFTETKSFLTKQMESDLNNVSNSLGLLLVPALET 59
           M+LF+QL  L   LFL+V  + ++ V    ++S    Q+ S   + + +L L L P ++ 
Sbjct: 1   MSLFKQLL-LAICLFLVVAFSGSFMVSLESSRSQYVNQLRSHAQDAATALALSLTPNID- 58

Query: 60  GDIATAETLINVIFEGGYYQQVKLTWLVDGKQQ-EWNNSLEIQGVPQWFINLGIFGTIKR 118
            D A  E +++ IF+ GYY  +K+  L       E +   +  GVP WF++L        
Sbjct: 59  -DPAMVELMVSSIFDSGYYASIKVVDLASNAVLVERHAEPDPGGVPAWFVHLIGLEAAGG 117

Query: 119 ESTITSGWLQLAQLEVTAHPGFGYHELWRILTNTIIVFSILFLVAIFLARFGLSWILKPL 178
           ++ ++ GW Q A++EV +HP F   +LW+    ++    +    +  L    L   L+PL
Sbjct: 118 DAIVSRGWQQAARVEVISHPMFAIAKLWQSALGSLGWLLLCGAASAVLGALLLRRQLRPL 177

Query: 179 HIVSEHAKSIANRQFGPELAIPKTSELKEVVIAFNSMSSQLKQIFSSLDEEVTALRKKNL 238
             + E + +IA R+F     +P+T EL+ VV A N M  +LK +F+   E    LR ++ 
Sbjct: 178 DYMVEQSHAIARREFLSLPDLPRTPELRRVVQAMNQMVEKLKALFTEQAERSERLRAESY 237

Query: 239 VDQVSGLPNRQYLVGRIN---SWLSEPGSGALFMAKFDWLEEVHAKYGYQVRDETIKLLS 295
            D ++GL NR+Y   ++N   S L +  +G L + +   L  ++A+ G Q  D+ ++ + 
Sbjct: 238 QDSLTGLSNRRYFEMQLNTRVSNLEDARAGYLLLLRVQGLAGLNARLGGQRTDQLLQAVG 297

Query: 296 EKLQSQLEEI--APGVVARIAAFEFAFLVFDVDKELISKYLQTLIRTVNQEISKAGGKPN 353
           E+L+           +++R    EFA L   +  E      Q L  T+ Q + + G    
Sbjct: 298 EQLRRTCASFPETKDLISRSRGGEFAVLAPGMVHEEAVNLAQALEATL-QSLHETGASDI 356

Query: 354 EHFA-IGIAERIGSMTVSDILAQSDNALQTAIKSGKVYHW--FESSEEQMFTREQ--WRE 408
           +  A IG+A      +   +L  +D AL  A ++     W   E     +    Q  W E
Sbjct: 357 DPVACIGLAPFSPGDSPQSLLKLADEALARA-ENQPTPGWVCLEQGVAAVAADSQHAWHE 415

Query: 409 KLSSAINAKLFQFRWQP-IQLTDGAGLLQHELYCQLEIGD-KLAHAGQFMPYVELLSLGA 466
           +L  A +   F+  +QP +       +L H++  +L+ G  +   AG+F+P++E      
Sbjct: 416 RLDQAFDNGHFELFFQPVVGCASVQRVLHHKVISRLQDGQGEALPAGRFLPWLERFGWMP 475

Query: 467 LLDKCLIQKVHDIHLLERNFEPVAINLTHQSLTDTD-FHQWLQQFLRSTPLADRLCFDIP 525
            LD  +++KV  +  L  + + +A+NL+  +L D    H+  +   ++  L  RL F+I 
Sbjct: 476 RLDVLVLEKV--LAHLRAHDQVLAVNLSAATLADPKALHRVFELLGQNAALGPRLVFEIG 533

Query: 526 ESGVYSNPEACEALCAIIRDNGAKFGIDHFGRQFGSMSYLQTLRPSYVKLDQSF-AYYDE 584
           E  +     A E L   +   G    +  FG +F  +  L  L  +Y+K+D S+    D 
Sbjct: 534 EEQL-PEQAALEQLTRRLHGLGFGLALQRFGGRFSMIGNLAHLGLAYLKIDGSYIRNIDH 592

Query: 585 NQHNAELCRALVNVARGLEIQVIVTGIQ 612
            QH      A+   A  +++ +I   ++
Sbjct: 593 EQHKRLFIEAIQRAAHSIDLPLIAERVE 620