Pairwise Alignments

Query, 639 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

Subject, 1422 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 95.5 bits (236), Expect = 1e-23
 Identities = 111/467 (23%), Positives = 207/467 (44%), Gaps = 43/467 (9%)

Query: 190  NRQFGPELAIP----KTSELKEVVIAFNSMSSQLKQIFSSLDEEVTALRKKNLVDQVSGL 245
            N  F  EL I     +  EL   V  F+ +S + +Q     +EE   LRK    D ++GL
Sbjct: 947  NSHFHMELTIDAIYDELGELSHYVGVFSDISRRKQQ-----EEE---LRKLTNNDLLTGL 998

Query: 246  PNRQYLVGRINSWLSEPGSGALFMAKFDWLEEVHAKYGYQVRDETIKLLSEKLQSQLEEI 305
            PNR  L   + + +++  + AL +   D  + ++   G+QV D+ +KL+S +++S + + 
Sbjct: 999  PNRSNLQVTLGNLVNKEINHALMVLDLDNFKRINDSLGHQVGDKLLKLVSVRIKSSVPKN 1058

Query: 306  APGVVARIAAFEFAFLVFDVDKELISKYLQTLIRTVNQEISKAGGKPNEHFAIGIAERIG 365
                + R+   EFA +V D   ++++     +   +    +      NE   +G++  +G
Sbjct: 1059 TN--IYRLGGDEFA-IVLDKTSDILAS--AAIAGRIVDAFNTVYEIDNEQLVLGVS--VG 1111

Query: 366  SMTVSD-------ILAQSDNALQTAIKSGKVYHWF--ESSEEQMFTREQWREKLSSAINA 416
             +   D       +L ++D A+  A  +G   + F  ES  E    + +    +   +  
Sbjct: 1112 IVLYPDDEQNEQALLRKADIAMYHAKSAGGNCYQFYSESLNEHAIKQLETENLIREGLKE 1171

Query: 417  KLFQFRWQP-IQLTDG--AGL-----LQHELYCQLEIGDKLAHAGQFMPYVELLSLGALL 468
             LF+  +QP + L  G  AG+     L H     +   D +  A +    VE+  +  L 
Sbjct: 1172 DLFEVYYQPKVDLKHGHVAGMEALVRLNHPTLGLIPPNDFIPLAEENGLIVEIGEI-VLR 1230

Query: 469  DKCL-IQKVHDIHLLERNFEPVAINLTHQSLTDTDFHQWLQQFLRSTPL-ADRLCFDIPE 526
              C   QK  +  L +     VA+NL+ +     D  Q ++  LR T L A  L  +I E
Sbjct: 1231 KACFAAQKWREQGLFKGR---VAVNLSSRQFALPDLQQRIESILRLTQLPASHLELEITE 1287

Query: 527  SGVYSNPEACEALCAIIRDNGAKFGIDHFGRQFGSMSYLQTLRPSYVKLDQSFA-YYDEN 585
              V   PE    +   +   G    +D FG  + S+SYL+      +K+D++F    D++
Sbjct: 1288 GTVIKQPEMAITVMQQLAKMGVSLALDDFGTGYSSLSYLKRFPIHTLKIDKAFVDDIDKS 1347

Query: 586  QHNAELCRALVNVARGLEIQVIVTGIQEKPQLDRFIPLKTTAYQGFI 632
              + ++  +++ +A  + + V+  G+++  QL+    L     QG+I
Sbjct: 1348 DRDLKMVDSIITIAHNMGLSVVGEGVEQAAQLNILRALNCEEIQGYI 1394