Pairwise Alignments

Query, 639 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

Subject, 796 a.a., diguanylate phosphodiesterase from Herbaspirillum seropedicae SmR1

 Score = 97.1 bits (240), Expect = 3e-24
 Identities = 105/458 (22%), Positives = 212/458 (46%), Gaps = 29/458 (6%)

Query: 174 ILKPLHIVSEHAKSIANRQFGPELAIPKTSELKEVVIAFNSMSSQLKQIFSSLDEEVTAL 233
           I  PL  +++ AK +    +   L I +  E+  +  AF +M  ++    +S + +++ L
Sbjct: 302 ITSPLRDLADVAKRLGEGDYSEGLFIRRQDEIGRLGNAFETMRLEI----ASRELKISRL 357

Query: 234 RKKNLVDQVSGLPNRQYLVGRINSWLSE----PGSGA-LFMAKFDWLEEVHAKYGYQVRD 288
             +   DQ++GLPNR      +   ++E    PG+   + M   D  ++V+   G+   D
Sbjct: 358 AYQ---DQLTGLPNRVQFADLLRDAIAEAARTPGAACYILMMDLDRFQQVNDVLGHSFGD 414

Query: 289 ETIKLLSEKLQSQLEEIAPGV-VARIAAFEFAFLVFDVDKELISKYLQTLIRTVNQEISK 347
           + ++ ++ +L +QL  + PG  ++R+   EFA L+  VD+E   +    ++R + Q +S 
Sbjct: 415 DLLRQVALRLSAQL--LHPGAKLSRLGGDEFAILLPGVDQEGAVEQALQILRALEQPLSL 472

Query: 348 AGGKPNEHFAIGIAERIGSMTVSDIL-AQSDNALQTAIKSGKVYHWFESSEEQMFTRE-Q 405
                +    IGI+        SD+L + ++ A+  A + G     ++ + +Q       
Sbjct: 473 HQQTVDLGAGIGISGYPAHGQSSDVLLSHAEVAMYIAKRKGSGLVIYDPAIDQSSQESLS 532

Query: 406 WREKLSSAINAKLFQFRWQP-IQLTDGAGLLQHELYCQLEIGDKLAHAGQFMPYVELLSL 464
              +L  A+    F    QP ++L  G  +    L   +           F+P+ E    
Sbjct: 533 LLSELRRALERDEFMLYLQPKLELCSGQVVGAEALVRWIHPEKGFIGPDNFIPFAETTGF 592

Query: 465 GALLDKCLIQKVHDI--HLLERNFE-PVAINLTHQSLTD----TDFHQWLQQFLRSTPLA 517
             +L   ++++V  +   L ++  +   ++NL+ + L D    T F   LQ+  R  P A
Sbjct: 593 IRMLTLWMMEQVARLSEQLQQQGVQLKFSVNLSTRDLLDQELPTAFAAILQRH-RLQPAA 651

Query: 518 DRLCFDIPESGVYSNPEACEALCAIIRDNGAKFGIDHFGRQFGSMSYLQTLRPSYVKLDQ 577
             LC +I ES +  +P   +     + + G    ID FG  + S++YL+ L    +K+D+
Sbjct: 652 --LCLEITESAIMDDPARAQNTLERLSNMGFALSIDDFGTGYSSLAYLKRLPVDELKIDK 709

Query: 578 SFAY-YDENQHNAELCRALVNVARGLEIQVIVTGIQEK 614
           SF     ++Q +A++ R+ V++   L ++V+  G++ +
Sbjct: 710 SFVMKMAQDQDDAKIVRSTVDLGHNLGLRVVAEGVESE 747