Pairwise Alignments

Query, 723 a.a., toxin secretion ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 591 a.a., ABC-type protease exporter, ATP-binding component PrtD/AprD from Pseudomonas fluorescens FW300-N1B4

 Score =  230 bits (586), Expect = 2e-64
 Identities = 159/558 (28%), Positives = 280/558 (50%), Gaps = 14/558 (2%)

Query: 160 LLKTLKDAAPIYRDALIASVLVNLFALVSPLFIMNVYDKVVPNLAFESLWVLAIGAGIAY 219
           L K L D   I       + L+N+  LV  ++++ VYD+V+ +    +L +L++     +
Sbjct: 12  LFKALGDYKSILISVGCFTALINVLMLVPSIYMLQVYDRVLSSQNETTLAMLSLMVVGFF 71

Query: 220 IFDLVMRQLRSYLIDVAGKKVDIIVSSQLFAKAVGIPLSKRSPSVGGMAKQLGEFDSIRD 279
            F  ++  +RS+++   G +++   + +++  A    L K   + G   + LG+   IR 
Sbjct: 72  AFIGLLEIVRSFIVIRIGSQLERRFNLRVYQAAFERNLFKGEGNAG---QSLGDLTHIRQ 128

Query: 280 ILTSATITTLVDLPFAVFFLIIIFIVAGDLAVLPLLGGAIIIGYTLYIQPKLKAAIDESN 339
            +T   +    D P+   +L +IF+    L VL   G  ++IG     +   K  + E+ 
Sbjct: 129 FVTGPALFAFFDAPWFPVYLFVIFLFNVWLGVLATAGAVLLIGLACLNEAMTKKPLGEAA 188

Query: 340 KFASLKHGHLIESLAALESIKAYGAEGLVQKSWQQMIGHTANWQLKAKKLS---NSVSNV 396
            F+          L   E+I+A G  G+++K W Q+       Q +A       +S+S  
Sbjct: 189 GFSQRSSQLATSHLHNAETIQAMGMLGVLRKRWFQVHSRFLGLQNQASDTGAVISSLSKT 248

Query: 397 ASFMVQLTVVGVVILGVYRVADNAISMGGIIAAVMLSSRAMSPMAQLASLLTRANHTASA 456
               +Q  V+G   LG   V    ++ G +IA  +L  R +SP+ QL ++  + +    A
Sbjct: 249 LRLCLQSLVLG---LGALLVIQGDMTAGMMIAGSILMGRVLSPIDQLIAVWKQWSGAKLA 305

Query: 457 LRQLDQIMTQEDEFENKGHLVSKTRLMGKIEADHVSFCYPGSEKPVLHPTSLSIQPGEKV 516
            R+LD ++     +      ++     G+I  + VS   PG     LH  + ++  GE +
Sbjct: 306 YRRLDALL---QAYPPTDEAMALPAPKGQITFEQVSAGPPGQRAATLHMVNFNLGAGEVL 362

Query: 517 AIIGRNGSGKSTLAKLLCGLYKPTKGSLRYDGIDSAQIHPSDLRRNFGYLPQDVVLFHGS 576
            ++G +GSGKSTLA++L G++    G++R DG D  + +  DL    GYLPQD+ LF GS
Sbjct: 363 GVLGASGSGKSTLARVLVGVWPTLGGTVRLDGADIHRWNRDDLGPYIGYLPQDIELFSGS 422

Query: 577 IRDNILFGTRQVSEHQLIRAVQISGVSLFTNLESEGLDQQVGEGGQALSRGQRQTVALAR 636
           I +NI    R+    +++ A Q +GV        +G D  +GE G  LS GQ+Q VALAR
Sbjct: 423 IAENIA-RFREADPQKVVEAAQQAGVHELILRMPQGYDTVLGEDGSGLSGGQKQRVALAR 481

Query: 637 ATLNDPPILLMDEPTASLDARAEKQFIRAMEHV-SKDRTLVIITHKMHLLKLVDRVIVLD 695
           A   +P ++++DEP ++LD   E     A+ H+ ++  +++++TH+   L   D+++VL+
Sbjct: 482 ALYGNPSLVVLDEPNSNLDTVGEAALAGAIAHMKARGTSVILVTHRSSALAQADKLLVLN 541

Query: 696 RGHVLADGPKNDVLEKLS 713
            G + A GP  +VL+ LS
Sbjct: 542 EGRLQAFGPSQEVLKALS 559