Pairwise Alignments

Query, 723 a.a., toxin secretion ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  288 bits (738), Expect = 5e-82
 Identities = 200/692 (28%), Positives = 338/692 (48%), Gaps = 12/692 (1%)

Query: 26  LDSLVLLTEYFGSPCSSESLAAGLPLSGAILTPDLVPQAAARAGLNARLTRKGLDQISPI 85
           ++++V   + F    +S  L   L +S A LT   + +AA   GL +++T+  +   + +
Sbjct: 28  IEAVVYAGQQFHKKSTSSQLKHALGVSYANLTDMEMREAADYLGLKSQITKLSIQAFNTL 87

Query: 86  MMPCILLLKDKKACLLRELTSEKAVIQLPETGGEETLPVEQLETLYVGYLFLVKQQYRGD 145
            +P ++  +     +++   +       P T    TL     E+     + L+      D
Sbjct: 88  PLPALIEYQGGWKVMIQTDDNGWTAYD-PATDSLHTLSFTSAESTAHYKVMLI-----AD 141

Query: 146 MRFDVHHHDNKSHWLLKTLKDAAPIYRDALIASVLVNLFALVSPLFIMNVYDKVVPNLAF 205
               V        W   ++       RD  + ++ + +FALVSP+   NV DKV+   + 
Sbjct: 142 ESLSVKEVKFGLSWFAPSILRQKSQLRDVFLYAIALQIFALVSPMLFENVIDKVLVGRSL 201

Query: 206 ESLWVLAIGAGIAYIFDLVMRQLRSYLIDVAGKKVDIIVSSQLFAKAVGIPLSK-RSPSV 264
            SL VLA+      I +     LR+ +      +V+  +S +L+   VG+PL+  +    
Sbjct: 202 SSLHVLALAMLALAIAEPAYSYLRNTVFGHLASQVNAELSGRLYRHLVGLPLTYFKQRQT 261

Query: 265 GGMAKQLGEFDSIRDILTSATITTLVDLPFAVFFLIIIFIVAGDLAVLPLLGGAIIIGYT 324
           G +  ++ E   IR  LT +T+  L+DL F   FL ++F  A  L  L +  G+++I + 
Sbjct: 262 GQIIARVREMAQIRQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVI--GSLVIYFV 319

Query: 325 LYI--QPKLKAAIDESNKFASLKHGHLIESLAALESIKAYGAEGLVQKSWQQMIGHTANW 382
           L++   P ++  ++   +  +     L E++  +E+IK    E    + WQ+++    N 
Sbjct: 320 LWLIAGPLIRKKVESEYESDANATTFLTEAVTGIETIKTTATEHRFLEQWQRILSQQLNR 379

Query: 383 QLKAKKLSNSVSNVASFMVQLTVVGVVILGVYRVADNAISMGGIIAAVMLSSRAMSPMAQ 442
              A+K         + + +LT   ++  GV  V    I+ G ++A  ML+     P+ +
Sbjct: 380 SFDAQKSGLIAGQAIALVQKLTAALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLR 439

Query: 443 LASLLTRANHTASALRQLDQIMTQEDEFENKGHLVSKTRLMGKIEADHVSFCYPGSEKPV 502
           LA +     HT  ALR++  I+ +  E   +G L S   L G IE  ++ F Y      V
Sbjct: 440 LAQIWQDFQHTLIALRRVGDILDEPRENSKQG-LASVPELDGGIEFSNIRFRYHQDAPEV 498

Query: 503 LHPTSLSIQPGEKVAIIGRNGSGKSTLAKLLCGLYKPTKGSLRYDGIDSAQIHPSDLRRN 562
           L   SL I+PG+ + + G +GSGKSTL +LL  LY P  G +  DG+D A   P  LRRN
Sbjct: 499 LANLSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRN 558

Query: 563 FGYLPQDVVLFHGSIRDNILFGTRQVSEHQLIRAVQISGVSLFTNLESEGLDQQVGEGGQ 622
              + Q+ +LF GS+ DNI     Q S+ ++  A Q++G   F      G +Q VGE G 
Sbjct: 559 MSVVLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGA 618

Query: 623 ALSRGQRQTVALARATLNDPPILLMDEPTASLDARAEKQFIRAMEHVSKDRTLVIITHKM 682
           ALS GQRQ +ALARA L +P ILL+DE T++LD  +E   +  M+ + + RT++ I H++
Sbjct: 619 ALSGGQRQRIALARALLVNPRILLLDEATSALDYNSEASIMSNMDEICRGRTVISIAHRL 678

Query: 683 HLLKLVDRVIVLDRGHVLADGPKNDVLEKLSL 714
           + ++  D + VLD+G V   G   ++L +  L
Sbjct: 679 NTIRHADNIFVLDKGQVAESGTHEELLAQQGL 710