Pairwise Alignments

Query, 723 a.a., toxin secretion ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 585 a.a., Type I secretion system ATPase, PrtD (NCBI) from Rhodospirillum rubrum S1H

 Score =  254 bits (649), Expect = 9e-72
 Identities = 168/556 (30%), Positives = 284/556 (51%), Gaps = 10/556 (1%)

Query: 160 LLKTLKDAAPIYRDALIASVLVNLFALVSPLFIMNVYDKVVPNLAFESLWVLAIGAGIAY 219
           L + LK A   +   +  S  +NL   VSPL+++ VYD+V+ + +  +L VL + A  A 
Sbjct: 18  LQEALKKARGGFVSTMAFSFFINLLLFVSPLYMLQVYDRVLTSRSNSTLVVLTLAAVGAL 77

Query: 220 IFDLVMRQLRSYLIDVAGKKVDIIVSSQLFAKAVGIPLSKRSPSVGGMAKQLGEFDSIRD 279
           I   ++  +RS ++   G  +D  +++++F+       + R P+ G   + L + D++R+
Sbjct: 78  IVLGLIEAVRSRILVRTGALIDTELNTRVFSSV--FQQAVRRPAAG-YTQALRDLDTLRE 134

Query: 280 ILTSATITTLVDLPFAVFFLIIIFIVAGDLAVLPLLGGAIIIGYTLYIQPKLKAAIDESN 339
            LT + +    D P+A  F+ + F++   L ++ L G  ++    +      +  + ++ 
Sbjct: 135 FLTGSGLIVFCDAPWAPLFIALGFVLHPLLGLVSLFGAIVVFALAIVNNLGTRGLLKDAG 194

Query: 340 KFASLKHGHLIESLAALESIKAYGAEGLVQKSWQQMIGHTANWQLKAKKLSNSVSNVASF 399
             +   + ++  SL   E ++A G    +Q+ W +        Q KA   +++V   +  
Sbjct: 195 TVSMHANNYVSSSLRNAEVLEAMGMMSNIQRRWSERHDAVIGLQAKASDRASAVMAASKS 254

Query: 400 MVQLTVVGVVILGVYRVADNAISMGGIIAAVMLSSRAMSPMAQLASLLTRANHTASALRQ 459
                 V ++  G Y    + IS G +IAA ++  RA+ P+               A  +
Sbjct: 255 FRMGLQVAILGTGAYLAIHSEISPGTMIAASIIMGRALQPVEMAVGQWKGLVAARGAYER 314

Query: 460 LDQIMTQEDEFENKGHLVSKTRLMGKIEADHVSFCYPGSEKPVLHPTSLSIQPGEKVAII 519
           L  ++      ++    ++  R  G++    V    PGS  P L   +L I PGE + +I
Sbjct: 315 LTDLLANNAAGKDT---MTLPRPEGRVSLQQVVIVPPGSSVPALRGVTLDIAPGEVLGVI 371

Query: 520 GRNGSGKSTLAKLLCGLYKPTKGSLRYDGIDSAQIHPSDLRRNFGYLPQDVVLFHGSIRD 579
           G + +GKSTLA+ L G++ P +G +R DG D       ++  + GYLPQDV LF GS+ +
Sbjct: 372 GPSAAGKSTLARALVGVWPPVQGIVRLDGNDLRHWKSEEIGPHLGYLPQDVELFDGSVAE 431

Query: 580 NIL-FGTRQVSEHQLIRAVQISGVSLFTNLESEGLDQQVGEGGQALSRGQRQTVALARAT 638
           NI  FG   +   ++I A + +GV        EG D ++G GGQALS GQRQ +ALARA 
Sbjct: 432 NIARFG--DIDPDKVIAAARKAGVHDMVQKLPEGYDTKIGVGGQALSGGQRQRIALARAV 489

Query: 639 LNDPPILLMDEPTASLDARAEKQFIRAMEHV-SKDRTLVIITHKMHLLKLVDRVIVLDRG 697
            NDP ++++DEP ASLDA  E   + A++ + +  +T+V+ITHK  LL  VD V+VL  G
Sbjct: 490 YNDPVLVVLDEPNASLDADGEAALMVAIDGMRAAGQTVVVITHKPTLLNAVDTVLVLKGG 549

Query: 698 HVLADGPKNDVLEKLS 713
            V   GP+ DVL K +
Sbjct: 550 LVEMKGPRADVLSKFA 565