Pairwise Alignments

Query, 624 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 620 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  173 bits (439), Expect = 2e-47
 Identities = 179/618 (28%), Positives = 279/618 (45%), Gaps = 29/618 (4%)

Query: 4   LLLLLLALGYSLLAQAGAPALVYTQESGDVIELTPWVSAFQASELIDYRELPPQNDPRWQ 63
           LL+LLL LG  L A A   AL+   +SG  +     +     +EL       P+   R+Q
Sbjct: 5   LLVLLLCLGTLLPAHADT-ALIGAHDSGRNLNAYVELLMDPGAELEVEDLQRPEVQARFQ 63

Query: 64  QLPKQGTHGMGAQNRWLRIDIDVRTH-PGSRVLSINNPLLDNLRLYHLVNGNLMTEHHFG 122
               + + G      W+++ +   +  P    L + +  L +LRLY             G
Sbjct: 64  PAQGKASVGQSPHPWWVKVTLQRASEAPAQWWLEVGSVTLKDLRLYLPDGDGGWHGRQSG 123

Query: 123 DSLPFDE-RLLLSTQFLYPL-QLRPWEHHTLLLRVDTEGSSHVPLTLMTPGHLSQMLESR 180
           + + F E R     + L+ L +L      T  LR      +  PL +     L +     
Sbjct: 124 ELVGFHEGRDHAYRRMLFRLPELSNQRPLTFYLRSYDPAGNSFPLKVWQLDALQEQAVGE 183

Query: 181 NLVQGFQLGILAAIGLFSLFVALASGSFSYSYYAAYVLSMTLLVASLQGVAFRYLWPQLP 240
           NL  G   G++ A+ L++LF+ L+    +Y +Y        L++  + G  F+YLWP  P
Sbjct: 184 NLFLGLIYGLILAMLLYNLFIFLSLRDTAYFWYVMTTSGALLMILGMTGHGFQYLWPNGP 243

Query: 241 AMQAWVIPFLLPLVMCF-ALMFAEKVLQLKYLNIRMLRICRFSATFSLFLALLSPFISYS 299
            +  W+    +P +  F A  F + +LQ +       R+  F+    +   LL+ F   +
Sbjct: 244 -VPFWLDRISIPALWGFSACRFTQTLLQTRRFVPWAHRLLTFALCLYVTAVLLNIFGLRA 302

Query: 300 LAMYCDLVALLGIAVVLLAFALVQALR-GQKLARLYFVGWIVFLASVIVTSLIYLGAIQT 358
              +   VAL   A+    +A  +  R G   A LY  G+ V L SV +  L   G IQ 
Sbjct: 303 FGAWV-FVALALTAIPASLWASFRRWRQGYFPALLYLCGFGVILGSVNLLLLRATGVIQP 361

Query: 359 T-----MEPLSPAMAGVTFEIVFMSLVLAIRYSDERKAKQRIQQEALEQAKRIREAREEA 413
                 + PL+ A   + F     S +  ++   ER A       ALE A R    + E 
Sbjct: 362 AAWSGYVFPLAVAAESILFSFALASRIQILK--QERAA-------ALEHADR---EKTER 409

Query: 414 LKVEAESNERLEEMVQERTLELEIVLRELNEVNQKLTEQTTIDSLTGVKNRAAFNKRLQA 473
           LK    S E L   V+ RT EL    R+L+E   +L +    D LT + NR    +R++A
Sbjct: 410 LKHMQASAEHLSLAVEARTAELAQANRDLSEREIELKQAAFHDPLTELPNRRYLIERIEA 469

Query: 474 EGRISRRQQTPMALLMLDIDHFKNINDKYGHLAGDYTLKAIADTLSAQLRRPTDLVSRFG 533
               + R+   +ALL++D+DHFK IND +GH AGD  L+ +   L   L R +D+ +R G
Sbjct: 470 AMAEAARRDESIALLLIDLDHFKPINDDHGHDAGDLLLRTLGQRLRG-LVRSSDMAARLG 528

Query: 534 GEEFAIILPSTDAE-GAVAVAEHIREAVEELTIKWEQFMIPLTVSIGVSSNIIESDEHPL 592
           G+EFAI+L   + E  A  VAE +   +  L + +    + +TVS+G +     +DE   
Sbjct: 529 GDEFAILLTGANVEQDASQVAERLLYEL-SLPVPYRGNSLAVTVSVGAAFFPHHADEF-T 586

Query: 593 QLLEQADKALYQAKHDGR 610
           QL + AD+ALY+AK  GR
Sbjct: 587 QLYKAADEALYRAKQQGR 604