Pairwise Alignments

Query, 624 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 318 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  144 bits (362), Expect = 7e-39
 Identities = 76/178 (42%), Positives = 111/178 (62%), Gaps = 2/178 (1%)

Query: 440 RELNEVNQKLTEQTTIDSLTGVKNRAAFNKRLQAEGRISRRQQTPMALLMLDIDHFKNIN 499
           R+L   N +L   ++ D LTG+ NR  + + L+ +    RR  +  AL+M DIDHFK IN
Sbjct: 142 RQLQAANAELQRLSSTDRLTGLYNRGHWEEMLRLDYARHRRYDSQAALVMFDIDHFKAIN 201

Query: 500 DKYGHLAGDYTLKAIADTLSAQLRRPTDLVSRFGGEEFAIILPSTDAEGAVAVAEHIREA 559
           D YGH  GD  ++ +AD +   L R +D+  R+GGEEF ++LP TD +GA+  AE +R+A
Sbjct: 202 DSYGHQVGDSVIQQVADLIRENL-RDSDVAGRYGGEEFVVLLPDTDKQGALIFAERLRQA 260

Query: 560 VEELTIKWEQFMIPLTVSIGVSSNIIESDEHPLQLLEQADKALYQAKHDGRNRVGLFQ 617
           VE   ++ EQ+ I  T+S+GV+   + +  H  QL+E AD ALY +K  GRNRV L +
Sbjct: 261 VEAREVRHEQYRIRFTISLGVADLSMPTTSH-AQLIEWADSALYVSKACGRNRVTLHE 317