Pairwise Alignments

Query, 624 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 664 a.a., diguanylate cyclase with GAF sensor from Synechococcus elongatus PCC 7942

 Score =  141 bits (356), Expect = 8e-38
 Identities = 76/177 (42%), Positives = 112/177 (63%), Gaps = 2/177 (1%)

Query: 441 ELNEVNQKLTEQTTIDSLTGVKNRAAFNKRLQAEGRISRRQQTPMALLMLDIDHFKNIND 500
           +L   NQ+L      D LTG+ NR  F++ L  E + + R+Q P+ L+++DID FK  ND
Sbjct: 479 QLAAANQQLLRLAQSDGLTGLANRRHFDQCLDIEWQRAIREQHPLGLILIDIDCFKQFND 538

Query: 501 KYGHLAGDYTLKAIADTLSAQLRRPTDLVSRFGGEEFAIILPSTDAEGAVAVAEHIREAV 560
            YGH AGD  LKA+A  L+  + RP DLV+R+GGEEF +ILP+T+ +G + +AE +R AV
Sbjct: 539 TYGHQAGDDCLKAVATALTQVIARPADLVARYGGEEFVVILPNTNEQGILQIAESMRSAV 598

Query: 561 EELTIKWEQFMI--PLTVSIGVSSNIIESDEHPLQLLEQADKALYQAKHDGRNRVGL 615
           ++L I      +   +++S+G  + +    + P  L+  AD+ALYQAK  GRNRV L
Sbjct: 599 QQLKIPHRSSSVCSSVSLSLGAVTWVPTPHKSPEALIAAADQALYQAKELGRNRVCL 655



 Score = 25.4 bits (54), Expect = 0.008
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 11/70 (15%)

Query: 422 ERLEEMVQERTLELEIVLRELNEVNQKLTEQTTIDSLTGVKNRAAFNKRLQAEGRISRRQ 481
           E L++MV ERT+ L+         N+KL  +    +L   + +AA  +++  E  ++R  
Sbjct: 274 ETLQQMVGERTVALD-------AANEKLERK----ALERKRAKAALQQQIYRERLVNRTA 322

Query: 482 QTPMALLMLD 491
           Q     L LD
Sbjct: 323 QRIRESLQLD 332