Pairwise Alignments

Query, 624 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 753 a.a., diguanylate cyclase with PAS/PAC sensor from Marinobacter adhaerens HP15

 Score =  142 bits (357), Expect = 7e-38
 Identities = 83/194 (42%), Positives = 122/194 (62%), Gaps = 8/194 (4%)

Query: 424 LEEMVQERTLELEIVLRELNEVNQKLTEQTTIDSLTGVKNRAAFNKRLQAEGRISRRQQT 483
           L++ +Q  ++ L  +   L E  QK + +   D LTG+KNR  F++  + E  +++R   
Sbjct: 566 LDQAIQRISITLSSIA--LREELQKFSYE---DGLTGLKNRRYFDQLFEHESAVAQRNDL 620

Query: 484 PMALLMLDIDHFKNINDKYGHLAGDYTLKAIADTLSAQLRRPTDLVSRFGGEEFAIILPS 543
           P++LL++DIDHFK  ND +GH AGD  LK +A  L  Q R  +DLV R+GGEEF +++P 
Sbjct: 621 PLSLLIIDIDHFKKFNDTHGHEAGDNALKIVAGILQKQFRE-SDLVCRYGGEEFVVVMPG 679

Query: 544 TDAEGAVAVAEHIREAVEELT-IKWEQFMIPLTVSIGVSSNIIESDEHPLQLLEQADKAL 602
             +E A+  A  +  AV ++  I  E+ +  LTVS+GV+S   ES E PLQ+L  AD+AL
Sbjct: 680 ATSEAAMDKASQLSSAVRDVAIIHREKDLGALTVSVGVAS-WPESGEKPLQILTLADRAL 738

Query: 603 YQAKHDGRNRVGLF 616
           Y+AK  GRNRV +F
Sbjct: 739 YRAKEAGRNRVEVF 752



 Score = 32.3 bits (72), Expect = 8e-05
 Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 40/274 (14%)

Query: 189 GILAAIGLFSL-FVALASGSFSYSYYAAYVLSMTLLVASLQG----VAFRYL-WPQLPAM 242
           G    I L ++ F  L +   +++  + + L+  L++ S       +A++ L W  L A 
Sbjct: 186 GFATLIALLAIIFALLQTEKKTFASISLFTLASALMLVSESQASLLIAYQPLMWDYLAAG 245

Query: 243 QAWVIPFLLPLVM--------CFALMFAEKVLQLKYLNIRMLR----ICRFSATFSLFLA 290
             +++P  L L++         + +    KV  L YL   +L     +   S+TF  F A
Sbjct: 246 SYYMLPVALALLLEQWLTNHRPWVINLIWKV-HLVYLVGALLGALAGVFDLSSTFPPFDA 304

Query: 291 LLSPFISYSLAMYCDLVALLGIAVVLLAFALVQALRGQKLARLYFVGWIVFLASVIVTSL 350
           L              LV+L+ I  V+L   + + LR Q++  L F    +F   +IV   
Sbjct: 305 LF-------------LVSLVIIFAVVLR-RIRRMLREQQILLLAFG---IFCVLLIVDMA 347

Query: 351 IYLGAIQTTMEPLSPAMAGVTFEIVFMSLVLAIRYSDERKAKQRIQQEALEQAKRIREAR 410
           +  G +     P+S  M   +  +V +SL     Y+  ++A +R+   +LE+    R A+
Sbjct: 348 VAHGVLPWGRVPVSWGMLLFSLAVVVISLW---HYAGTQEALKRLNV-SLEEKVAERTAK 403

Query: 411 EEALKVEAESNERLEEMVQERTLELEIVLRELNE 444
            EAL    ++  R+     E+   L  VL EL +
Sbjct: 404 AEALARREQARVRMLTFENEKNRILGDVLTELQD 437