Pairwise Alignments

Query, 423 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

Subject, 408 a.a., Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) from Xanthomonas campestris pv. campestris strain 8004

 Score =  130 bits (328), Expect = 6e-35
 Identities = 120/421 (28%), Positives = 191/421 (45%), Gaps = 44/421 (10%)

Query: 16  LITLRALGLVLQLVLTFFGADAFGLSLQQSAL-VYIFGLELLFLGLTLKLRHALVLSAPG 74
           L +LR L    Q       +   GL+L Q  L   +  L +  L   L++ H   +S   
Sbjct: 12  LCSLRWLATAGQAATILVASGLMGLTLPQEPLWAGVAALAVFNLYAQLRVAHRGAVSPAT 71

Query: 75  LFLSLLIDTLLWISWLYFSGGATNAFISLLLLPIAIAAVTLPFWAPWTLAAITTLAYSLM 134
            F  +L+D  +    + +SGG  N F SL L+ IA+AA+ LP      +AA     Y + 
Sbjct: 72  EFGHILVDVTVLTWMVGWSGGIANPFGSLFLVLIALAALALPLSWAMAVAAACVAGYVIS 131

Query: 135 L-YAVPAMEGGHHEHAGHMAGGSMASHYVGMWFNFLLSALVLTTSVALIARRLRQTDAEL 193
             + +P   GG            +  H  GM  NFLLS +V+      +A  LR+ + E+
Sbjct: 132 AAFGLPLPYGGFDP---------LTLHMWGMAANFLLSTVVVLVFATRLALSLREREREI 182

Query: 194 AALRESQLRQEQLIALGTASAQMSHQLATPLASLRLLLDEVAEGDTEPGLVAEMDLALTR 253
           + LRE   R E ++AL T +A ++H+L TPLA++ LL D++A+   +  L          
Sbjct: 183 STLRERFARNEGIVALATHAASVAHELNTPLATMTLLADDIADQCDQVEL---------- 232

Query: 254 CETSLNSLREATEAIRERKLTVVSAGQLLHLLK--------QQVLLLMPDVVMDISLSDE 305
               L +LRE      ER L + +     HL +        +Q  L+ P + +     +E
Sbjct: 233 -REDLETLRELLVQCHERVLALAAPADNGHLSREVAVRDVLEQWRLVRPTIEL---RRNE 288

Query: 306 VAGARLSTDVSLLPSLLALVDNGAKASKKHGGEARVWLSARLVNEACIRLDIRDAGPGID 365
            A  RL     +   L+ L++N A A ++  G   + L+ R+ ++  +  ++RD G G D
Sbjct: 289 DAPLRLMLQPGVSHLLMVLLNNAADAGER-AGRPLIDLTLRVEDDQLVG-EVRDYGLGFD 346

Query: 366 AQKLTALG-----ARPVLSEQGLGMALMLSHASLERLGGELHLGNLPEGGCLASVRLPLE 420
             +    G      +P     G+G+ L LSHA++ERL GEL +      G     RLPL 
Sbjct: 347 TSQAMLPGTLFNSGKP----DGMGVGLALSHATVERLQGELWMLPAEGSGARVGFRLPLS 402

Query: 421 Q 421
           +
Sbjct: 403 E 403