Pairwise Alignments

Query, 423 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

Subject, 419 a.a., ATP-binding region, ATPase-like:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  152 bits (384), Expect = 2e-41
 Identities = 124/386 (32%), Positives = 194/386 (50%), Gaps = 23/386 (5%)

Query: 40  LSLQQSALVYIFGLELLFLGLT-LKLRHALVLSAPGLFLSLLIDTLLWISWLYFSGGATN 98
           L L    L    G  L+  GLT ++LR +L L+     L L +D L+  + LY+SGG+ N
Sbjct: 42  LPLPWLQLSITLGCSLVLCGLTVIRLRTSLPLTELEYALQLALDLLIHSALLYYSGGSAN 101

Query: 99  AFISLLLLPIAIAAVTLPFWAPWTLAAITTLAYSLMLYAVPAMEGGHHEHAGHMAGGSMA 158
            F+S  L+P+ IAA TLP+     L+      Y+L++     +E         +A  +M 
Sbjct: 102 PFVSYYLVPLTIAAATLPWRYSLILSGFALSMYTLLMVRSYPLE------TDSIARENMQ 155

Query: 159 SHYVGMWFNFLLSALVLTTSVALIARRLRQTDAELAALRESQLRQEQLIALGTASAQMSH 218
            +  GMW +F L+A V+T   A +A  LR+ +   A  RE  LR +QL+A+ T +A  +H
Sbjct: 156 IY--GMWLSFALAAAVITFFAAKMAEELRRQEQLRAERREEGLRDQQLLAVATQAAGAAH 213

Query: 219 QLATPLASLRLLLDEVAEGDTEPGLVAEMDL---ALTRCETSLNSLREATEAIRERKLTV 275
           +L TPLA++ +LL E+ +  ++P L  ++ +    + +C+ +L  L  A EA R   +  
Sbjct: 214 ELGTPLATMSVLLKEMRQDHSDPALQDDLSVLQEQVKQCKQTLQQLVRAAEANRRMAVEY 273

Query: 276 VSAGQLLHLLKQQVLLLMPDVVMDISLSDEVAGARLSTDVSLLPSLLALVDNGAKASKKH 335
            +A + L     +  L+ P+V        +     L+    L  +LL L++N A A    
Sbjct: 274 QAATRWLDESLNRWHLMRPEVSYRFYKLGKGEAPMLAPPPDLTQALLNLLNNAADAC-PD 332

Query: 336 GGEARV-WLSARLVNEACIRLDIRDAGPGIDAQKLTALGARPVLSE--QGLGMALMLSHA 392
           G E  + W SA    E CI   IRD G G+       +G +P  +   +G G+ L LS A
Sbjct: 333 GLEVNLDWDSA----EICI--SIRDHGAGVPLAIAEQIG-KPFFTTKGKGFGLGLFLSKA 385

Query: 393 SLERLGGELHLGNLPEGGCLASVRLP 418
           S+ R GG + L +  EGG L  +RLP
Sbjct: 386 SVTRAGGSVKLYSHEEGGTLTELRLP 411