Pairwise Alignments

Query, 423 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

Subject, 449 a.a., ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score = 61.6 bits (148), Expect = 5e-14
 Identities = 72/249 (28%), Positives = 110/249 (44%), Gaps = 26/249 (10%)

Query: 181 LIARRLRQTDAELAALRESQLRQEQLIALGTASAQMSHQLATPLASLR--LLLDEVAEGD 238
           ++A+   +  A L +L  SQ    QL+        +SH+L +PLA LR  L L E AE  
Sbjct: 211 VLAKDFNRMGARLQSLIGSQ---RQLLR------DVSHELRSPLARLRIALALAERAEPA 261

Query: 239 TEPGLVAEMDLALTRCETSLNSLREATEAIRE-RKLTVVSAGQLLHLLKQQVLLLMPDVV 297
               L   +     R E  ++ +        E R    V    LL  LK    L   D  
Sbjct: 262 EREKLWPRLGRECDRLEALISEILALARLDAELRGPEPVDIEALLQRLKSDTQLDGVDQN 321

Query: 298 MDISLSDEVAGARLSTDVSLLPSLLA-LVDNGAKASKKHGGEAR-VWLSARLVNEACIRL 355
           + + + D +            P ++   +DN  + + +     + + L A LV +  IRL
Sbjct: 322 IRVEVQDNL-------QFKGWPDMIERALDNLLRNALRFNPSGQSIDLQATLVGDH-IRL 373

Query: 356 DIRDAGPGIDAQKLTALGA----RPVLSEQGLGMALMLSHASLERLGGELHLGNLPEGGC 411
            +RD GPG+  + LT LG      P  +  G G+ L ++  + ER GG L LGN P+GG 
Sbjct: 374 SVRDHGPGVADEHLTQLGEPFYRAPGQTTPGHGLGLAIAKRAAERHGGTLMLGNHPDGGF 433

Query: 412 LASVRLPLE 420
           +A++ LP E
Sbjct: 434 IATLDLPRE 442