Pairwise Alignments

Query, 808 a.a., exoribonuclease II (RefSeq) from Shewanella amazonensis SB2B

Subject, 864 a.a., ribonuclease R from Ralstonia sp. UNC404CL21Col

 Score =  706 bits (1823), Expect = 0.0
 Identities = 387/788 (49%), Positives = 509/788 (64%), Gaps = 31/788 (3%)

Query: 17  PIPSREFILEYLRSQTSPQPRDSIAEALKIHDEERLEALRRRLRAMERDGELVFTRGQCY 76
           PIPSRE IL  LR+  SP     IA+AL +  +E  +   +RL AMERDG++   R   Y
Sbjct: 7   PIPSREEILGVLRTSGSPLSATDIAKALSVTRKEH-DGFIKRLTAMERDGQIELNRKGRY 65

Query: 77  GLPERMDLMSGTVLGHKDGFGFFRPDNGGDDLFINERDMQLYFHGDKVLAQKAGVDRRGR 136
            L  + + + G V+GH+DGFGFF  D+G  D+F+ ER+MQ   HGD+ L +  G DRRGR
Sbjct: 66  ELAHQPNFIEGRVIGHRDGFGFFVRDDGEPDIFLPEREMQKAMHGDRALVRAVGYDRRGR 125

Query: 137 RDARIVRLLSERSAALVGRFYVDAGMAFVVADDKRIPHEILIANEDKNGARHGDVVVIEL 196
            + +IV +L   +  ++GR   ++G   V  +DKR+  +ILIA + +  A+ G VV +E+
Sbjct: 126 SEGQIVEILQRANKRVIGRLLSESGTLVVAPEDKRLGRDILIAPKGQGKAKVGQVVSVEI 185

Query: 197 TRRPGRYVRAGGKVTEVLGKQMAPGMEIEIALRNYDLPHQWSAVIEKKLRRIPDYVTDED 256
              P RYV+  G+V EVLG+   PGMEIEIA+R Y +PH++S   +++   +PD V D D
Sbjct: 186 LEYPDRYVQPIGRVVEVLGEIDDPGMEIEIAVRKYGVPHEFSEPTQREAEALPDVVRDAD 245

Query: 257 KEGRVDLRELPLVTIDGEDARDFDDAVYAERKRGG---GWRLWVAIADVSHYVRTDSALD 313
             GR+DLR++PLVTIDGEDARDFDDAVYAE  + G   GWRL VAIADVSHYVR    LD
Sbjct: 246 LAGRIDLRDVPLVTIDGEDARDFDDAVYAEPVKIGRSKGWRLIVAIADVSHYVRPGHPLD 305

Query: 314 KEARARGNSVYFPSQVIPMLPEKLSNGLCSLNPGVDRLCMVAEMTISAKGGLSGYKFYPA 373
            +A  R  SVYFP +VIPMLPEKLSNGLCSLNP VDRLCMV +  I+AKG +  Y+FYPA
Sbjct: 306 ADAIDRATSVYFPRRVIPMLPEKLSNGLCSLNPEVDRLCMVCDAVITAKGEIKAYQFYPA 365

Query: 374 VMHSHARFTYTQVAAMLEG--GEVKDEHKALFPHLKVLQELYLCLDEQRAERGAIAFETL 431
           VMHS AR TY +V A+L    G    +   L PHL+ L ELY  L + R ERGAI F+T 
Sbjct: 366 VMHSKARLTYNEVWAILSNVKGPEAAKRAPLVPHLQELYELYQTLLKARRERGAIDFDTT 425

Query: 432 ETQFIFNEQRKIDRIVPRARNQAHKIIEECMILANVAAAKFVIKHKGHVLYRVHEKPSEQ 491
           ET  + N Q KI++I+PR RN AH++IEECM+ ANV AA+ + K+K   LYRVH  P+E+
Sbjct: 426 ETYIVCNAQGKIEQILPRTRNDAHRLIEECMLTANVCAAEMLEKYKHPALYRVHAGPTEE 485

Query: 492 KLTQFKDFLAERGLSMTGGLEPEPADYLALMAQLAGRPDAELIQVMLLRSMRQAVYTPDN 551
           KL   + FL   GL++ GG +P+ ADY  LM ++A RPDA ++Q MLLRSM+QAVY+PDN
Sbjct: 486 KLQALRAFLKTSGLTLGGGDKPQAADYAELMEKVAARPDAPMLQTMLLRSMQQAVYSPDN 545

Query: 552 EGHFGLALEAYSHFTSPIRRYPDLVLHRVIRYLLAKER---------------------- 589
            GHFGLA  AY+HFTSPIRRYPDL++HR I+ +L + R                      
Sbjct: 546 IGHFGLAYPAYAHFTSPIRRYPDLLVHRSIKAILNRTRYVPALAPGVQLNSALSPKARRL 605

Query: 590 -GEASEKWTADGGYHYQLEEL-DLLGEECSNTERRADEATRDVSDWLKCEFMQDHVGDSF 647
             EA +   A      ++E +   LG  CS  ERRADEA+RDV  WLKC FM+D +G+ F
Sbjct: 606 QAEAEKGVPAAVVNKAKVEAIWHELGVHCSANERRADEASRDVEAWLKCYFMRDKLGNEF 665

Query: 648 SGVIASVTSFGLFVRLDELFIDGLVHISSLGSDYFQYDPQRQRLIGENSGQIYQIGDPVA 707
           SG +++VTSFG+FV+LDEL+++GLVH++ LGSDYFQYD  R  L GE +G  Y++ D V 
Sbjct: 666 SGTVSAVTSFGIFVQLDELYVEGLVHVTELGSDYFQYDEARNELRGERTGIRYRLTDRVR 725

Query: 708 VKVASVNLDDRQIDLQMEGERPGRKKAGKKPTTARDRANLEGARTGNGKPGKGGSVRSQL 767
           V++  V+LD R++D ++  E   +     K T A + A    A      P  G     QL
Sbjct: 726 VQLLRVDLDARKMDFRLIQEPSTKALRPAKVTGAPEAAAARQAAVATPAPPVGRKKPRQL 785

Query: 768 AGGKLGGS 775
           A   LGG+
Sbjct: 786 A-ALLGGT 792