Pairwise Alignments

Query, 729 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 732 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1119 bits (2894), Expect = 0.0
 Identities = 549/732 (75%), Positives = 616/732 (84%), Gaps = 3/732 (0%)

Query: 1   MRNLVAAALVLSSGVALADEGQWQPYQMPSIADKLKARGIDIPAEQLADLSRYPMNAVVG 60
           MR  + AALVL+ G+A ADEGQWQPYQMPSIADKL ARGIDIPA++LADL+ YPMNAVVG
Sbjct: 1   MRIALVAALVLTCGIATADEGQWQPYQMPSIADKLSARGIDIPADKLADLTSYPMNAVVG 60

Query: 61  LGYCTASFVSPQGLAVTNHHCAFRAIQYNSSKEKNYLADGFLATSMDKEPSAGPNERLYV 120
           LGYCTASFVSPQGL VTNHHCA++AIQYN+ KE NYL  GFLATSMDKEPSAGPNERLY+
Sbjct: 61  LGYCTASFVSPQGLVVTNHHCAYKAIQYNTKKEHNYLEQGFLATSMDKEPSAGPNERLYI 120

Query: 121 TEAVTDVSAQIRDALPEEPLARVEAIENRQKALIKECESDDNYRCSVRSFHNGLEYYLIK 180
           TEAVTDV++ +   L ++PL R E IEN  KALIK CE+DDNYRC+VRSFHNGLEYYLIK
Sbjct: 121 TEAVTDVTSDVTKDLSQDPLKRYEEIENHSKALIKSCEADDNYRCNVRSFHNGLEYYLIK 180

Query: 181 QLMIRDVRLVYAPPESVGGYGGDIDNYEYPRHSGDFTFLRAYVGKDGKPAPYAEDNVPYQ 240
           QLMIRDVRLVYAPPESVGGYGGDIDNYEYPRHSGDF FLRAYVGKDGKPA ++EDN+PY 
Sbjct: 181 QLMIRDVRLVYAPPESVGGYGGDIDNYEYPRHSGDFAFLRAYVGKDGKPAAFSEDNIPYT 240

Query: 241 PKSFLKINASGVKAGDGVFAAGYPGSTSRYRLTTELEFASDWLYPTQAKRFQARIDTIEA 300
           PKS+LK+NA GVKAGDGVF AGYPG+T+RY LT+EL+FASDWLYPTQAKR+Q +IDTIEA
Sbjct: 241 PKSYLKVNADGVKAGDGVFVAGYPGTTNRYNLTSELKFASDWLYPTQAKRYQLQIDTIEA 300

Query: 301 MGAADTELAIKYAGTVAGMANRMKKLNGLLDGFKATDIAAIKQQREDAFMTWYASHGDAK 360
           MG  D ++AIKYAG +A MANRMKKLNGLL GFKATDI  IKQQRE+ F+ W   + +  
Sbjct: 301 MGQKDADIAIKYAGNMASMANRMKKLNGLLAGFKATDIVGIKQQRENDFLAWLTKNPNLN 360

Query: 361 Q--MDELKALIKEGQTQYQTTYYFNNAQSSDLLTAANSLYRLAKEKQKADADRELGYQER 418
           Q  + EL+ L+ E Q Q QT YYF NAQSS LLTAAN+LYRLAKEKQK+DA+RE+GYQER
Sbjct: 361 QNLISELEVLLAEQQLQTQTNYYFTNAQSSTLLTAANNLYRLAKEKQKSDAEREIGYQER 420

Query: 419 DMKMFADRLKRIDSSFDVKVDKVLWQADIEEYLGQNQRVDVLDKMLTVKE-GQDLSSMLD 477
           D+ MF+ RLKRIDSSFDVKVDK LW  D+  YL Q  RV  LD ML + +    L++ LD
Sbjct: 421 DLAMFSSRLKRIDSSFDVKVDKTLWLQDLNAYLSQPNRVAALDNMLNLNDKNVSLAAKLD 480

Query: 478 GLYAATGLTDQATRLGWMDKTPADFEASDDPFIKLAVALYDTRMAQEKAEKTLDGKLSIA 537
           GLY+ T LTDQA RL WM+     FE S DPFI+LAVALYDT MAQEKAEK L GKLS A
Sbjct: 481 GLYSLTTLTDQAQRLAWMEADAKAFETSSDPFIRLAVALYDTNMAQEKAEKILAGKLSTA 540

Query: 538 RPAMMQAVIAYNKDKGWPVYPDANGTLRITYGMVDGYQSRDALYKQPFTRLEGIVAKHTG 597
           RPA M AVI Y K   WPVYPDANGTLRI+YGMVDGYQSRDALYKQPFTRL+GIVAKHTG
Sbjct: 541 RPAYMAAVIDYYKANNWPVYPDANGTLRISYGMVDGYQSRDALYKQPFTRLDGIVAKHTG 600

Query: 598 VEPFNAPQKVLDAIKRGDMGKHNVDDLYPDARSFMCKLFSCLDKPEAFNSVPVNFLSSVD 657
           VEP+NAP+K+LDAI     G H V  +Y D R ++C+LFSCLDKPE FNSVPVNFLSSVD
Sbjct: 601 VEPYNAPKKLLDAISVQRFGDHLVKSVYQDPRGWICRLFSCLDKPEEFNSVPVNFLSSVD 660

Query: 658 TTGGNSGSPVFNGRGELVGLNFDSTYEAITKDWFFNPEITRAVHVDVRYILWMMDKVDNA 717
           TTGGNSGSPVFNG+GELVGLNFDSTYEAITKDWFFNP ITRAVHVD+RYILWMMD+VD+A
Sbjct: 661 TTGGNSGSPVFNGKGELVGLNFDSTYEAITKDWFFNPTITRAVHVDIRYILWMMDEVDHA 720

Query: 718 QNLLQELTLVTN 729
            NL++EL LV N
Sbjct: 721 DNLIKELDLVRN 732