Pairwise Alignments

Query, 326 a.a., tRNA-dihydrouridine synthase A (RefSeq) from Shewanella amazonensis SB2B

Subject, 343 a.a., putative TIM-barrel protein, nifR3 family from Dechlorosoma suillum PS

 Score = 96.7 bits (239), Expect = 7e-25
 Identities = 88/312 (28%), Positives = 148/312 (47%), Gaps = 30/312 (9%)

Query: 5   LNRTFSVAPMLDWTDRHYRYFARLMSKEALLYTEMVTTGAILHG--KGDYLAYNQEE-HP 61
           L     VAPM   TDR +R   + +    L  +EMVT+ ++L+G  K    A ++ E  P
Sbjct: 8   LRNNLFVAPMAGVTDRPFRQLCKTLGA-GLAVSEMVTSNSLLYGSKKTQRRANHEGEVAP 66

Query: 62  LALQLGGSDPKDLATCAKLAEARGYDEVNINVGCPSDRVQNGRFGACLMAEPKLVAECVD 121
           +++Q+ G+DP  +A  AK     G   ++IN+GCP+ +V N   G+ LM +  LV   ++
Sbjct: 67  ISVQIAGADPAMMAEAAKYNVDNGAQIIDINMGCPAKKVCNVMAGSALMQDEVLVGRILE 126

Query: 122 AMRQQV-SVPVTVKTRIGIDEQDSYGFLTDFVETVSAAGCDTFIIHARKAWLQGLSPKEN 180
           A+   V   PVT+K R G +  +             A+G     IH R         + +
Sbjct: 127 AVVGAVPDTPVTLKFRTGWNRLNKNA--PTIARIAEASGIRAVAIHGR--------TRAD 176

Query: 181 REIPPLDYERVYQLKRDYPQLSISINGGVTSIEQAKTHLAQL---DGVMVGREAYQNPYI 237
           +     +YE +  +K     + +  NG +T+ E+A+ H+ ++   DGVM+GR A   P+I
Sbjct: 177 QYTGEAEYETIALVKSQI-GIPVIANGDITTPEKAR-HVLEVTGADGVMIGRAAQGRPWI 234

Query: 238 LASVDTELCGKPAVVSSREEVIGKLLPYIGKHLADGGRLNHIS-------RHIIGLYQGL 290
              ++  L     +   R E I ++L    +HL D      I        +HI    +GL
Sbjct: 235 FREIEHFLKTGEHLPPPRVEEIHRILQ---EHLQDLYAFYGIETGVKIARKHISWYTKGL 291

Query: 291 PGSRAWRRHLSE 302
            GS A+R+ +++
Sbjct: 292 VGSAAFRKTMNQ 303