Pairwise Alignments

Query, 293 a.a., membrane protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 302 a.a., multidrug DMT transporter permease from Pseudomonas fluorescens FW300-N2C3

 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 73/281 (25%), Positives = 123/281 (43%), Gaps = 18/281 (6%)

Query: 8   LLELHSAVLLFGGTALFSKLIP--LGALDITVYRCAIAALVLALIVKATRHSLRLGNKRD 65
           +L L S   ++G + LF ++I   +G L    +R +IA + L +I+   R +     K  
Sbjct: 6   ILRLLSLAAIWGASFLFMRIIAPVIGTLPTAFFRVSIAFVGLLVILALMRVNWNFRGKLK 65

Query: 66  YGIALALGVIVSLHWVTYFASMQMSSVAIGMIAFF--TYPVMTVLVEPLINGTRPHLRDL 123
             + + LG+I S    T++ S+    +  G  A F  T P+M VL+  L    +  L  +
Sbjct: 66  --VVMVLGLINSGIPATFY-SLAAQVLPAGYSAIFNATTPLMGVLIGGLFFSEQLTLAKV 122

Query: 124 VCGVAVLTGVALLIPEASLGNDITL--GILVGVLSAALFTARNLLHKRYFAQYTGPQA-- 179
                 L GV +L     +  D+ L  G L  +L+   +     L +R+     G  +  
Sbjct: 123 SGVFLGLLGVGILTRAGPVAFDLQLLMGALACLLATTCYGFAGFLTRRWLDHQGGLDSRL 182

Query: 180 -----MFYQTLVAVLFLGSFVESTPPEVTS--DVWQLLILLGVIFTATPHALFTSALRHL 232
                MF  T+  +   G  V S PP       VW  L+ LG++ TA  + L+   L  +
Sbjct: 183 SALGSMFGATVFLLPLFGYSVISQPPASWGGWSVWLSLLGLGLVCTALAYILYFRLLSSI 242

Query: 233 SAKTVGLVSCLQPFYGTVLALLLLGETVNLSTLLGGLLVVS 273
                  V+ L P +G +   LLL E + ++ L GG+L+ +
Sbjct: 243 GPVKSMTVTFLIPPFGVLWGALLLDEPLGMAHLYGGVLIAA 283