Pairwise Alignments

Query, 293 a.a., membrane protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 297 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

 Score =  129 bits (324), Expect = 8e-35
 Identities = 83/273 (30%), Positives = 135/273 (49%), Gaps = 1/273 (0%)

Query: 11  LHSAVLLFGGTALFSKLIPLGALDITVYRCAIAALVLALIVK-ATRHSLRLGNKRDYGIA 69
           LH   L+FG T +F KL       I   R A A + LA   + A+    +     D+   
Sbjct: 10  LHIGALMFGLTGVFGKLAAASPAIIVFGRAAFAVIALAFFARFASSTGWQKLEAVDWRRL 69

Query: 70  LALGVIVSLHWVTYFASMQMSSVAIGMIAFFTYPVMTVLVEPLINGTRPHLRDLVCGVAV 129
           L  G++++ HWV++F +++++ VAI  + F ++P  TV++E LI   R    +++    V
Sbjct: 70  LLSGLLLAGHWVSFFIAVKVAGVAIATLGFASFPAFTVILEGLIFRERIRANEILLVALV 129

Query: 130 LTGVALLIPEASLGNDITLGILVGVLSAALFTARNLLHKRYFAQYTGPQAMFYQTLVAVL 189
             G+ L+ P+  L ++ T G+L  V S  LF   +L ++    +    QA   Q +V  L
Sbjct: 130 SVGLVLVTPDFDLASEATSGLLWAVGSGLLFALLSLTNRASSGRIPAVQAALCQNVVVAL 189

Query: 190 FLGSFVESTPPEVTSDVWQLLILLGVIFTATPHALFTSALRHLSAKTVGLVSCLQPFYGT 249
            L         EV +  W  + LLGV  T   H+LF ++L  + A+T  +V  L+P YG 
Sbjct: 190 CLLPVAAPGLSEVRAIDWLWIGLLGVFCTGVAHSLFVASLAVIKARTAAVVFALEPVYGI 249

Query: 250 VLALLLLGETVNLSTLLGGLLVVSTAVYETAQS 282
            +A LL  E   L  L+GG L++   V  ++ S
Sbjct: 250 TVAWLLFDENPTLRMLIGGALIIIAIVVSSSLS 282