Pairwise Alignments

Query, 293 a.a., membrane protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 307 a.a., Permeases of the drug/metabolite transporter (DMT) superfamily from Xanthomonas campestris pv. campestris strain 8004

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 73/270 (27%), Positives = 112/270 (41%), Gaps = 6/270 (2%)

Query: 10  ELHSAVLLFGGTALFSKLIPLGALDITVYRCAIAALVLALIVKATRHSLRLGNKRDYGIA 69
           +L  A +L G   +F        +    YRC   AL L +      H   L  +R     
Sbjct: 18  QLLLAEVLIGSVGVFVHESGQDPVTAVFYRCLFGALFLTVCGVLGGHLRGLWRERRLLRD 77

Query: 70  LAL-GVIVSLHWVTYFASMQMSSVAIGMIAFFTYPVMTVLVEPLINGTRPHLRDLVCGVA 128
            A+ GV++ L+WV  FA M  SS+ +  + +  +P + +++  ++ G R    DL   + 
Sbjct: 78  AAISGVLLVLNWVALFAGMARSSIGVATMVYHVFPFVMLILAAVVQGERTRRADLGWTLL 137

Query: 129 VLTGVALLIPEASLGNDITLGILVGV---LSAALFTARNLLHKRYFAQYTGPQAMFYQTL 185
              GVA       L        L+G+   L AAL    +LL  R   +      +  Q  
Sbjct: 138 AFIGVACSADPLRLWQSADRSYLLGIGLTLLAALLCGASLLMSRRIGRERPLAVVTVQCW 197

Query: 186 VAVLFLGSFVESTPPEVTSDVWQLLILLGVIFTATPHALFTSALRHLSAKTVGLVSCLQP 245
           V  L L  F  S         W  L+ LGVI +   + LF S+ RHL   T+ +++ + P
Sbjct: 198 VGTLLLMGFSSSAALHPGLH-WAWLVGLGVIHSGIVYVLFYSSYRHLHVATIAVLAFVYP 256

Query: 246 FYGTVLALLLLGETVNLSTLLG-GLLVVST 274
               +L  LL G  +     LG GL+V  T
Sbjct: 257 LVTLLLDYLLYGHALAPVQWLGLGLIVCGT 286