Pairwise Alignments

Query, 293 a.a., membrane protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 296 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  399 bits (1025), Expect = e-116
 Identities = 203/290 (70%), Positives = 237/290 (81%)

Query: 2   SKASSGLLELHSAVLLFGGTALFSKLIPLGALDITVYRCAIAALVLALIVKATRHSLRLG 61
           S   SGL+ELH AVLLFGGTALFSKLIPL ALDIT  RC IAAL LAL+VK +   LRL 
Sbjct: 5   SSERSGLIELHLAVLLFGGTALFSKLIPLSALDITALRCCIAALALALLVKVSGKHLRLN 64

Query: 62  NKRDYGIALALGVIVSLHWVTYFASMQMSSVAIGMIAFFTYPVMTVLVEPLINGTRPHLR 121
             +DYGIAL LG+IVSLHWVTYFA+MQ+SSVAIGMIAFFTYPVMTVLVEP   G R  L 
Sbjct: 65  RGKDYGIALGLGIIVSLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVLVEPFFTGKRLELA 124

Query: 122 DLVCGVAVLTGVALLIPEASLGNDITLGILVGVLSAALFTARNLLHKRYFAQYTGPQAMF 181
           D++ G+ VL GV+LLIPEA+LGND+TLGI++GVLSAALFTARNLLHKRYFA Y+G QAM+
Sbjct: 125 DIISGICVLLGVSLLIPEANLGNDVTLGIIIGVLSAALFTARNLLHKRYFASYSGAQAMY 184

Query: 182 YQTLVAVLFLGSFVESTPPEVTSDVWQLLILLGVIFTATPHALFTSALRHLSAKTVGLVS 241
           YQT V+ LFL  ++E  P  + ++VW L+ILLG++FTA PHALFTSALR LSAKTV LVS
Sbjct: 185 YQTGVSALFLLPWLEVDPSAIQANVWWLVILLGIVFTAAPHALFTSALRQLSAKTVSLVS 244

Query: 242 CLQPFYGTVLALLLLGETVNLSTLLGGLLVVSTAVYETAQSHRQQRQKKA 291
           CLQP YG +LALL+LGE + + TL+GG LVV TAVYET +SH+  R +KA
Sbjct: 245 CLQPLYGALLALLILGEGLAMKTLIGGALVVFTAVYETQKSHKANRAQKA 294