Pairwise Alignments

Query, 293 a.a., membrane protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 300 a.a., DMT family transporter from Ralstonia sp. UNC404CL21Col

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 8/280 (2%)

Query: 1   MSKASSGLLELHSAVLLFGGTALFSKLIPLGALDITVYRCAIAALVLALIVKATRHSLRL 60
           M+  + G +E+ +A+++ G    F         D+  +RC   AL L L+V A    LR 
Sbjct: 1   MNDKTRGTVEMTAAMIISGTIGWFVVRSGQPVADVVFWRCVFGALTL-LVVCAGLGLLRG 59

Query: 61  G-NKRDYGIALALGVIVSLHWVTYFASMQMSSVAIGMIAFFTYPVMTVLVEPLINGTRPH 119
               R  GIA   GV + ++W+  FA+   +S++I    + T P M V +  L    +  
Sbjct: 60  AITWRRAGIAALGGVAIVINWLLLFAAYPRASISIATAVYNTQPFMLVGLGALFLSEKLT 119

Query: 120 LRDLVCGVAVLTGVALLI---PEASLGNDITLGILVGVLSAALFTARNLLHKRYFAQYTG 176
              L        GV L++   P AS G D   GI + + +A  +    LL K+     T 
Sbjct: 120 AAKLTWLALAFIGVVLIVQVGPAASAGTDYLTGIAMALGAAFAYAVAALLIKKLAG--TP 177

Query: 177 PQAM-FYQTLVAVLFLGSFVESTPPEVTSDVWQLLILLGVIFTATPHALFTSALRHLSAK 235
           P  +   Q  V VL L      + P   +  W +L+ +GV+ T   + L   A++ L   
Sbjct: 178 PHLIALIQVCVGVLMLAPLANLSHPPADAHAWVMLVTVGVVHTGLMYILLYGAIQRLPTH 237

Query: 236 TVGLVSCLQPFYGTVLALLLLGETVNLSTLLGGLLVVSTA 275
             G +S + P     + ++  G  + L+  LG   ++  A
Sbjct: 238 LTGSLSFIYPIVAIAVDIVAFGHRLQLAQFLGAAAILLAA 277



 Score = 23.9 bits (50), Expect = 0.005
 Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 70  LALGVI-VSLHWVTYFASMQMSSVAIGMIAFFTYPVMTVLVEPLINGTRPHLRDLVCGVA 128
           + +GV+   L ++  + ++Q     +     F YP++ + V+ +  G R  L   +   A
Sbjct: 213 VTVGVVHTGLMYILLYGAIQRLPTHLTGSLSFIYPIVAIAVDIVAFGHRLQLAQFLGAAA 272

Query: 129 VLTGVA 134
           +L   A
Sbjct: 273 ILLAAA 278