Pairwise Alignments

Query, 650 a.a., DNA mismatch repair protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 763 a.a., DNA mismatch repair protein MutL (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  267 bits (682), Expect = 2e-75
 Identities = 190/454 (41%), Positives = 240/454 (52%), Gaps = 29/454 (6%)

Query: 3   IQVLPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIDIDKGGSKLIRIRDNGGG 62
           IQVLP  L NQIAAGEVVERPASV+KELVENSLDAGAT V++ +D GG  LI +RD+G G
Sbjct: 37  IQVLPTDLRNQIAAGEVVERPASVVKELVENSLDAGATTVEVTLDNGGQSLIMVRDDGTG 96

Query: 63  IPKAELALALARHATSKVQTLEDLEAILSFGFRGEALASISSVSRLTLTSRTTEQAEAWQ 122
           IP  EL LA+ RHATSKV  L +L  I SFGFRGEAL SI+SVSR  +TS      +   
Sbjct: 97  IPAEELELAVTRHATSKVANLAELARIGSFGFRGEALPSIASVSRFRMTSAPV-APDGTP 155

Query: 123 AYAEGSEVA----IRVMPAAHPVGTTIEVADLFFNTPARRRFLKSDKTEFTHIDEWLKRI 178
             A   EVA    +   PAA   GT +EV DLF N PAR +FLK+  TE     E   R+
Sbjct: 156 GEATCIEVAHGHVVSAGPAALHRGTIVEVRDLFANVPARLKFLKTQATELKRAQELFARL 215

Query: 179 ALIRSDVHFSLSHNGKPVRQYRCAATDTQYLQRLAQVAGRAFADSAIKVDCQHDGMGLSG 238
           AL R DV F+LS  G+ V ++    T     +RLA +   A  D+    D   DG+ + G
Sbjct: 216 ALTRPDVAFTLSAGGREVLRFPAGQT---LARRLAVLWPPAVVDTLHPFDRMTDGIRVHG 272

Query: 239 YLQSP-ALSDMVDCHYFYVNGRLIRDRLVNHAVRQAF-GELGTFEQPAFVLSLTLDPHQV 296
               P       D    YVNGR + DRL+  AVR+A+ G L   E P   L L +DP +V
Sbjct: 273 LTADPRGAQPRPDRMLLYVNGRAVNDRLLLKAVREAYKGRLLAREYPQLALFLDIDPEEV 332

Query: 297 DVNVHPAKHEVRFHQARYVHDFILQVLQSALSQMQDLPLAEELPRA--QESPASVREHTA 354
           DVNVHPAK+EVRF   R V   +L+ L  +L +M  +   +E   A   ++P +V     
Sbjct: 333 DVNVHPAKNEVRFRDERAVFVAVLRALGESLDRMPAMGAGDEAAGALPGQNPFAVGGQQP 392

Query: 355 G----YAPYTFNRDAATEAAGVLSSLPDTQRSQRQPEKAASGQRSSVDAGLSQ------- 403
           G         F + +   AAG   S PD  R + +P     GQ  + D  + +       
Sbjct: 393 GGWRTGEHGQFGQASQPHAAGNNPSAPDAPRREARP-LGFWGQADARDVIIDKRQREDDP 451

Query: 404 -----GSSAHRASQTGLGQSGNAATFETSERHGS 432
                G+ AH A   G    G  AT +     GS
Sbjct: 452 YAAPAGNDAHGAHDAGHIPHGGHATADPFGPSGS 485