Pairwise Alignments
Query, 1763 a.a., sensory box histidine kinase/response regulator (RefSeq) from Shewanella amazonensis SB2B
Subject, 1548 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F
Score = 558 bits (1439), Expect = e-162
Identities = 351/861 (40%), Positives = 476/861 (55%), Gaps = 46/861 (5%)
Query: 853 RYHFPSGELRWLEAGARGSKQQDALVWNGYLM-DISGRKRMETELAQSEAHFRALFDNAG 911
RY P GE+RW + +D L+ DI+ K + EL +EA +R + +A
Sbjct: 561 RYLRPDGEVRWADVRCALIGDRDITPRRVTLINDITELKEQQAELKDTEAWYRGIVHSAP 620
Query: 912 IGIVNLDDRGIIKDCNGQFVSDLGISSDSLKRKQLADLMHPEDRALATGLYQALAESEQG 971
+V +D G I CN Q LG L + + E R L S
Sbjct: 621 DAMVVVDGEGRIVLCNPQLERLLGYEMGELTGHLVEQFLPEEVRERHVKLRNDFLASPLQ 680
Query: 972 SISGEWRMLD--GDGELMWMAVIASVLEEGDGGERSVVMSIANITRLKLLSDELMAAKED 1029
I E ++ DG + + + S L D S ++ +I+ K EL AKE
Sbjct: 681 VIGHEREVIGVRKDGTRLPLEISLSKLPPSDRHPMSACGALRDISLRKRSEAELRRAKEM 740
Query: 1030 ADAANQAKSDFLANMSHEIRTPMNAIIGMSQLCLQTELDRKQRNYVEKIERASKSLLGII 1089
A+ A + KSDFLANMSHEIRTPMNAIIGM+ L L+TELD +Q +YV KI + + LLGI+
Sbjct: 741 AEEATRLKSDFLANMSHEIRTPMNAIIGMAHLALKTELDPRQADYVRKIRASGQHLLGIL 800
Query: 1090 NDILDFSKIEAGKLDIEVVPFQLDTILEDLGDMFSVKAADKQLELLFSVAPGVPTHLEGD 1149
NDILDFSKIEAGKL +E F+L+T+L+ + ++ S KAA K LE + VA VP L GD
Sbjct: 801 NDILDFSKIEAGKLTVENTEFELETVLDTVANLVSEKAATKGLEFVLDVAANVPPVLRGD 860
Query: 1150 PLRLSQVLINLMNNAIKFTERGEVMLSISELARDEDQVQLKFAVRDSGIGLTAEQQAKLF 1209
PLRL Q+LIN NNA+KFTE GE+++ + L + V L+FAVRD+GIGLT EQ+A+LF
Sbjct: 861 PLRLGQILINYANNAVKFTEHGEIVIHVETLETGDTDVLLRFAVRDTGIGLTDEQKARLF 920
Query: 1210 KSFSQADTSTTRKYGGTGLGLAICKQLVELMGGEIGVDSQFGNGSTFYFTVSVKVAQNAQ 1269
SF QADTSTTRKYGGTGLGLAI K+L +LMGG +GVDS G GSTF+FT + + +
Sbjct: 921 VSFQQADTSTTRKYGGTGLGLAIAKKLADLMGGGVGVDSVPGGGSTFWFTARLGLGSGRR 980
Query: 1270 LNVEQ-ELEGMAVLVVDDNSTARDILRTTLQSMGFSVDSARSGMEALE-----KCAERDY 1323
+ + +L G+ VLVVDDN AR +L L+ M F A G AL+ + A+ +
Sbjct: 981 ALLPRIDLRGLRVLVVDDNPQARMVLAHMLEGMTFRPVMADGGETALDLLREARDADTPF 1040
Query: 1324 RIALIDWKMPEMDGTETAARMRELKQPPLILMVSAHANSEFIDKVEEMGINGYITKPISA 1383
+ +DW+MP MDG ETA +R L + +V+AH E E +G++ + KP+
Sbjct: 1041 GMVFLDWQMPGMDGLETARNIRTLAPDLPVAIVTAHGREEIFAASEGVGVSAVLVKPVQP 1100
Query: 1384 SRLLDGIMSALGRQGHKPVRRKAQPMDAQ--KLSGLKGKRILLVEDNEMNQEVASEFLEQ 1441
S L D M LG H R P D + L G++G R+LLVEDNE+N+EVA L +
Sbjct: 1101 SLLFDTAMRLLGAV-HPAPRAAVPPPDTRPAMLDGVRGSRVLLVEDNELNREVALGLLAE 1159
Query: 1442 VGVVLSIADNGQIALEKLGQQSFDLVLMDCQMPVMDGYQATRELRKLPGLAELPVVAMTA 1501
G+V A++G A+ + + +DLVLMD QMPVMDGY+ATR +R+ LP+VAMTA
Sbjct: 1160 AGLVPDAAEDGAQAVRMVMEGDYDLVLMDVQMPVMDGYEATRIIRRSREADSLPIVAMTA 1219
Query: 1502 NAMAGDKEMCLLAGMNDHIAKPIEVGILYQTLLQYL----------------CPEAKGLE 1545
NAM D+E CL AGMNDH+AKPI+ L+ L+++L P +
Sbjct: 1220 NAMRSDREACLAAGMNDHVAKPIDPDELFAALIRWLPRRGEAERQQDAADTTAPGTQPAT 1279
Query: 1546 SADADAAADQEVTSLTSWPEHED-----------------LDIDRGLQLVQNSERLYRRI 1588
AD + A + TS S P + LD + GL+ V + Y +
Sbjct: 1280 QADTLSGASPD-TSPASGPVRQHGQNGQGRQNGQNDARHVLDPEAGLRRVLGKQATYHTL 1338
Query: 1589 LERFVTSQAQAGKKIRKALALGQQEDAVRLAHTLKGVAGNLSADTLVEEARQLEAKLAQG 1648
L RFV+ A A +I + G A R AHTLKGVAG L A + +A LEA L
Sbjct: 1339 LRRFVSQHADAATRIAGFIQSGDGAGATREAHTLKGVAGTLGARAVQSQAADLEAALRHA 1398
Query: 1649 EACEAELEAVETRLVTIVAAI 1669
+ E E + +++ A+
Sbjct: 1399 ASQEHTTEVLALLRISLDEAV 1419
Score = 68.6 bits (166), Expect = 6e-15
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 500 LFNDVTEQFS-------AAAWSNAVLEAAPEAMLIVDESGQLVFSNSRCQELFGYSGEEM 552
L ND+TE AW ++ +AP+AM++VD G++V N + + L GY E+
Sbjct: 591 LINDITELKEQQAELKDTEAWYRGIVHSAPDAMVVVDGEGRIVLCNPQLERLLGYEMGEL 650
Query: 553 LNLNIDALIPENERHGHQGKRQLFIEGGRDKVMANGKPLHALKCGGEQFPVQIGLSLLPA 612
++ +PE R H R F+ +V+ + + + ++ G + P++I LS LP
Sbjct: 651 TGHLVEQFLPEEVRERHVKLRNDFLASPL-QVIGHEREVIGVRKDGTRLPLEISLSKLPP 709
Query: 613 DSRGQRQVAASIRDLTEQLAVERQIRESE 641
R ++RD++ + E ++R ++
Sbjct: 710 SDRHPMSACGALRDISLRKRSEAELRRAK 738
Score = 62.0 bits (149), Expect = 6e-13
Identities = 56/173 (32%), Positives = 79/173 (45%), Gaps = 34/173 (19%)
Query: 883 LMDISGRKRMETE-----LAQSEAHFRALFDNAGIGIVNLDDRGI-IKDCNGQFVSDLGI 936
L+D + R+ E E L +SEA FRA+F+ AGIGIV+ + RG+ I N F +GI
Sbjct: 435 LLDQTRRQATELEESRELLRRSEAFFRAVFETAGIGIVS-ERRGLGIDRANPAFSDFIGI 493
Query: 937 SSDSLKRKQLADLMHPEDRALATGLYQAL----------------------AESEQG--- 971
S L+ + L D HP+DR L L E +Q
Sbjct: 494 SEPELRGRDLEDFFHPDDREALEALLSRLDPDKLEYAVPRHGNPERDGLDAGEPDQARST 553
Query: 972 -SISGEWRMLDGDGELMWMAVIASVLEEGDGGERSVVMSIANITRLKLLSDEL 1023
++ E R L DGE+ W V +++ + D R V + I +IT LK EL
Sbjct: 554 ITVRAEHRYLRPDGEVRWADVRCALIGDRDITPRRVTL-INDITELKEQQAEL 605
Score = 31.6 bits (70), Expect = 8e-04
Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 16/163 (9%)
Query: 624 IRDLTEQLAVERQIRESESRFRGLVSNIPGAVYRTRINGTWTMEYVSDNITELTGYP--- 680
I D+TE + +++++E+ +RG+V + P A+ ++G + + + L GY
Sbjct: 592 INDITELKEQQAELKDTEAWYRGIVHSAPDAM--VVVDGEGRIVLCNPQLERLLGYEMGE 649
Query: 681 -AWHFIESKKRSFGSLILDEDAERCDAIISGALA---EQHAFEVEYRIRHRDGSLRWVHE 736
H +E + +E ER + + LA + E E +DG+ +
Sbjct: 650 LTGHLVE-------QFLPEEVRERHVKLRNDFLASPLQVIGHEREVIGVRKDGTRLPLEI 702
Query: 737 KGKASYDEDGNPVWFDGSLNDITESKLAQERIEQSREQLETIT 779
D +P+ G+L DI+ K ++ + +++E E T
Sbjct: 703 SLSKLPPSDRHPMSACGALRDISLRKRSEAELRRAKEMAEEAT 745
Score = 30.4 bits (67), Expect = 0.002
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 7/119 (5%)
Query: 721 EYRIRHRDGSLRWVHEKGKASYDEDGNPVWFDGSLNDITESKLAQERIEQSREQLETITE 780
E+R DG +RW + D D P +NDITE K Q ++ + I
Sbjct: 559 EHRYLRPDGEVRWADVRCALIGDRDITPRRVT-LINDITELKEQQAELKDTEAWYRGIVH 617
Query: 781 SVPSTVYQLVWRSERDRRFTFLSSAAMATLGFHRNEVLDNFELVAERIVEEDRGEIIQM 839
S P + + + + R + LG+ E+ + LV + + EE R +++
Sbjct: 618 SAPDAMVVV----DGEGRIVLCNPQLERLLGYEMGELTGH--LVEQFLPEEVRERHVKL 670