Pairwise Alignments
Query, 1763 a.a., sensory box histidine kinase/response regulator (RefSeq) from Shewanella amazonensis SB2B
Subject, 1236 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3
Score = 489 bits (1259), Expect = e-142
Identities = 313/796 (39%), Positives = 454/796 (57%), Gaps = 33/796 (4%)
Query: 762 KLAQERIEQSREQLETITESVPSTVYQLVWRSERDRRFTFLSSAAMATLGFHRNEV--LD 819
K A ER E+ L ++ +S+P + +++ + + AA LG+ +E+ L
Sbjct: 447 KDATERREREYALLRSLLDSIPEAIVF----KDKEGNYLGCNKAAERMLGYTESEMIGLS 502
Query: 820 NFELVAERIVEEDRGEIIQMLAGRHGMQWTKAFRYHFPSGELRWLEA---GARGSKQQDA 876
+ +L + + R E Q+L R +++ + L L+ RG Q
Sbjct: 503 SEDLTSPEMGIRIRAEDEQILKDRTPLRYQEKVELAGKPVLLDTLKLPFYNRRGELQGLI 562
Query: 877 LVWNGYLMDISGRKRMETELAQSEAHFRALFDNAGIGIVN--LDDRGIIKDCNGQFVSDL 934
VW D++ +L SE + D G+ + LD II CN + S L
Sbjct: 563 AVWR----DVTREYESAEQLRLSEERYHLAMDAVEDGLWDWYLDSEHII--CNPSYYSML 616
Query: 935 GISSDSLKR--KQLADLMHPEDRALATGLYQALAESEQGSISGEWRMLDGDGELMWMAVI 992
G + + L HP+DR E+ + E+R+L +G W+
Sbjct: 617 GYKPNEFPALVSAIDQLTHPDDRIRVEEYRNQYLENPVDAYEIEFRILGKNGSYHWVLSR 676
Query: 993 ASVLE-EGDGGERSVVMSIANITRLKLLSDELMAAKEDADAANQAKSDFLANMSHEIRTP 1051
V+E DG + +V + +ITR K L+ AK+DA+ AN KS+FLANMSHEIRTP
Sbjct: 677 GRVVEFTADGQPKRMVGTHKDITRHKSNEVALLEAKQDAELANLYKSEFLANMSHEIRTP 736
Query: 1052 MNAIIGMSQLCLQTELDRKQRNYVEKIERASKSLLGIINDILDFSKIEAGKLDIEVVPFQ 1111
MNAIIGM QL +T L +Q++Y+EK +++SLL IINDILDFSKIEAGKL++E VPF
Sbjct: 737 MNAIIGMLQLAQRTSLTAQQKDYLEKAGFSAQSLLRIINDILDFSKIEAGKLELERVPFP 796
Query: 1112 LDTILEDLGDMFSVKAADKQLELLFSVAPGVPTHLEGDPLRLSQVLINLMNNAIKFTERG 1171
LD +L+ D+ ++KA ++ +ELL L+GDPLRL QVLINL++NA+KFT+ G
Sbjct: 797 LDKVLDHALDLNALKAQEQGVELLLYAPVTAGLILKGDPLRLGQVLINLLSNAVKFTQSG 856
Query: 1172 EVMLSISELARDEDQVQLKFAVRDSGIGLTAEQQAKLFKSFSQADTSTTRKYGGTGLGLA 1231
E+ L ++ + ++ LKF VRD+GIG++ +QQ KLF +F+QAD STTRKYGGTGLGL+
Sbjct: 857 EIELGCEDVGERDHRITLKFWVRDTGIGISKDQQEKLFDAFAQADGSTTRKYGGTGLGLS 916
Query: 1232 ICKQLVELMGGEIGVDSQFGNGSTFYFTVSVKVAQNAQ---LNVEQELEGMAVLVVDDNS 1288
I K LV +MGG++ V S+ G GSTF FT+S ++A+ A+ L V ++L + LVVDDN
Sbjct: 917 ISKHLVSMMGGKMQVQSELGVGSTFSFTISFEIAEEAKVEPLVVPEKLNNLRTLVVDDNP 976
Query: 1289 TARDILRTTLQSMGFSVDSARSGMEALEKCAERDYRIALIDWKMPEMDG------TETAA 1342
TA I ++ F VD+A SG EAL K + + L+DW MPEMDG +T
Sbjct: 977 TALQIYSALMRDFHFEVDTAASGAEALYKLSRDPIDLLLLDWMMPEMDGGDVISAIDTMV 1036
Query: 1343 RMRELKQPPLILMVSAHANSEFIDKVEEMGINGYITKPISASRLLDGIMSALGRQGHKPV 1402
+ + P+I+M++A+A +V+ + + KP AS L D I++A +P
Sbjct: 1037 AEGRIAKRPIIIMMTAYAAEPLQHEVDSANVFAVLQKPFKASSLFDEIIAAF---ADEPR 1093
Query: 1403 RRKAQPMDAQKL-SGLKGKRILLVEDNEMNQEVASEFLEQVGVVLSIADNGQIALEKLGQ 1461
QP+D + G +LLVEDN +NQ+VA+E L+ G + +A NGQIAL+ +
Sbjct: 1094 LNVVQPIDELPVEEGEHTGLVLLVEDNFINQQVATELLKSAGYEVVVAGNGQIALDIIDS 1153
Query: 1462 QSFDLVLMDCQMPVMDGYQATRELRKLPGLAELPVVAMTANAMAGDKEMCLLAGMNDHIA 1521
+ FD VLMD QMPVMDG A R LR+ LP++AMTA+AM+GD+E L AGMN HI
Sbjct: 1154 RPFDAVLMDIQMPVMDGLTAARALRERFSADVLPIIAMTAHAMSGDREKSLAAGMNAHIT 1213
Query: 1522 KPIEVGILYQTLLQYL 1537
KPI + L++TL ++
Sbjct: 1214 KPIVLTELFETLSHWI 1229
Score = 63.9 bits (154), Expect = 1e-13
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 36/276 (13%)
Query: 516 AVLEAAPEAMLIVDESGQLVFSNSRCQELFGYSGEEMLNLNIDALI-PENERHGHQGKRQ 574
++L++ PEA++ D+ G + N + + GY+ EM+ L+ + L PE G R
Sbjct: 462 SLLDSIPEAIVFKDKEGNYLGCNKAAERMLGYTESEMIGLSSEDLTSPE------MGIR- 514
Query: 575 LFIEGGRDKVMANGKPL---HALKCGGEQFPVQIGLSLLP-ADSRGQRQ-VAASIRDLTE 629
I ++++ + PL ++ G+ PV + LP + RG+ Q + A RD+T
Sbjct: 515 --IRAEDEQILKDRTPLRYQEKVELAGK--PVLLDTLKLPFYNRRGELQGLIAVWRDVTR 570
Query: 630 QLAVERQIRESESRFRGLVSNIPGAVYRTRINGTWTMEYVSDNITELTGYPAWHFIESKK 689
+ Q+R SE R+ + + +G W S++I Y + + K
Sbjct: 571 EYESAEQLRLSEERYHLAMDAVE--------DGLWDWYLDSEHIICNPSY--YSMLGYKP 620
Query: 690 RSFGSLI--LDEDAERCDAIISGALAEQH------AFEVEYRIRHRDGSLRWVHEKGK-A 740
F +L+ +D+ D I Q+ A+E+E+RI ++GS WV +G+
Sbjct: 621 NEFPALVSAIDQLTHPDDRIRVEEYRNQYLENPVDAYEIEFRILGKNGSYHWVLSRGRVV 680
Query: 741 SYDEDGNPVWFDGSLNDITESKLAQERIEQSREQLE 776
+ DG P G+ DIT K + + ++++ E
Sbjct: 681 EFTADGQPKRMVGTHKDITRHKSNEVALLEAKQDAE 716
Score = 47.4 bits (111), Expect = 1e-08
Identities = 96/473 (20%), Positives = 197/473 (41%), Gaps = 58/473 (12%)
Query: 153 EWDWWTEALKRPKGYWTAPYYDDGAGNIQMITFSQP-FGDEEPLGVVTTDLALSSLPIRL 211
++ + T A+ + + + Y D G + T P + D+E +G + D+ L+SL ++
Sbjct: 198 QFQYATPAMNPQRSVFWSEAYVDSTGKGLLTTLGVPVYLDDEFMGSINLDMTLASLARQI 257
Query: 212 GID---PKKLLVLDARGTLIYHPD---NNLTRNATISDWLVKDVASEEAAKKVLEGEAQE 265
+ P +++LD + ++ H D +++ R IS + ++ S ++ +A E
Sbjct: 258 RVYFKMPGTVILLDQQNNILSHSDFDGSDINRVYHISQRIPSELHSLPESELF---DAHE 314
Query: 266 VALKDLNGVQYLASIAKVSPLAWRVLVITPQTELVETFLKGFSSLTLSLLVLALILLVT- 324
++ NG Y+ S+A + WR+L + + +L + ++ LT L+V+AL +LVT
Sbjct: 315 GIIR--NGY-YIHSVA-LHNAPWRLLYLQNEDDLFQDSVEKLQ-LTFILVVIALSVLVTI 369
Query: 325 -------SYYS-AKRLT-----------EPLEALETGIVDFSKGLIKRLQKPEGVVREIA 365
S+ S A RL +P E + G + + + ++ + +A
Sbjct: 370 VHWQTRRSFVSPASRLLSHLEGCSQEPRKPPEKITPGWEPWFLLVSRIFEENKQYTHHLA 429
Query: 366 TLSHKFNEMAEVLEEREQALLDSRGNRFA---TLIDGMSDKSFYCSMTPDGNIDQVSAGV 422
+ + +++ ER + + R +A +L+D + + + +GN +
Sbjct: 430 EQNKRLDKLVARRTERLKDATERREREYALLRSLLDSIPEAIVF--KDKEGNYLGCNKAA 487
Query: 423 EKVLGISP-EVLKRKYQRLFSSNA---INEQNWQFMEMALRGEAVPPHQVEMAGADGSLR 478
E++LG + E++ + L S I ++ Q ++ + P E G
Sbjct: 488 ERMLGYTESEMIGLSSEDLTSPEMGIRIRAEDEQILK-----DRTPLRYQEKVELAGKPV 542
Query: 479 RLDLFMQPLLDDEGQLISVEMLFNDVTEQFSAAAWSNAVLEAAPEAMLIVDE-------S 531
LD P + G+L + ++ DVT ++ +A E AM V++
Sbjct: 543 LLDTLKLPFYNRRGELQGLIAVWRDVTREYESAEQLRLSEERYHLAMDAVEDGLWDWYLD 602
Query: 532 GQLVFSNSRCQELFGYSGEEM--LNLNIDALIPENERHGHQGKRQLFIEGGRD 582
+ + N + GY E L ID L ++R + R ++E D
Sbjct: 603 SEHIICNPSYYSMLGYKPNEFPALVSAIDQLTHPDDRIRVEEYRNQYLENPVD 655