Pairwise Alignments

Query, 761 a.a., transketolase, central region (RefSeq) from Shewanella amazonensis SB2B

Subject, 352 a.a., branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) from Pseudomonas fluorescens FW300-N2C3

 Score =  144 bits (362), Expect = 1e-38
 Identities = 102/289 (35%), Positives = 149/289 (51%), Gaps = 21/289 (7%)

Query: 415 LMASHDNVVVCGEDVGKKGGVYHVTSRLVERFGPSRVINTLLDETSILGLATGMAHNGLL 474
           ++   DNVVV G+DVG  GGV+  T  L  ++G SRV +  + E+ I+G+A GM   GL 
Sbjct: 32  MLERDDNVVVFGQDVGYFGGVFRCTEGLQNKYGTSRVFDAPISESGIVGVAVGMGAYGLR 91

Query: 475 PIPEIQFLAYVHNAEDQIRGEAATLPFFSNGQYTNPMVIRI---AGLAYQKGFGGHFHND 531
           P+ EIQF  YV+ A DQI  EAA L + S G++T PM +R+    G+     +GG  H+ 
Sbjct: 92  PVAEIQFADYVYPASDQIISEAARLRYRSAGEFTAPMTLRMPCGGGI-----YGGQTHSQ 146

Query: 532 NSFTVFRDIPGLILACPSNGADAQGMLRECVRLAREEQRLVIFLEPIALY--MTRDLHEP 589
           +   +F  + GL    PSN  DA+G+L   +    E    VIFLEP  LY       H+ 
Sbjct: 147 SIEAMFTQVCGLRTVMPSNPYDAKGLLIASI----ENDDPVIFLEPKRLYNGPFDGHHDR 202

Query: 590 GDSLWA---AQYVPEREATPLPFGEPGRFGEGKDLCIISYGNGYYLSRQAEKALAEAGID 646
             + W+   +  VP+   T +P         GKD+ I++YG   Y+S+ A +   E GID
Sbjct: 203 PVTPWSKHPSAQVPDGYYT-VPLDVAAITRPGKDVTILTYGTTVYVSQVAAE---ETGID 258

Query: 647 CTLVDLRYLAPLNEAAICDIAANCRHVLVVDECRRSGSVSEAIVTALHE 695
             ++DLR L PL+   I          +VV E  R+      +V+ + E
Sbjct: 259 AEVIDLRSLWPLDLETIVKSVKKTGRCVVVHEATRTCGFGAELVSLVQE 307