Pairwise Alignments

Query, 574 a.a., single-stranded-DNA-specific exonuclease RecJ (RefSeq) from Shewanella amazonensis SB2B

Subject, 574 a.a., single-stranded-DNA-specific exonuclease RecJ from Parabacteroides merdae CL09T00C40

 Score =  249 bits (635), Expect = 3e-70
 Identities = 167/561 (29%), Positives = 291/561 (51%), Gaps = 27/561 (4%)

Query: 20  LHPLIKQLLARRGVAGDD-----CEQELSRLLRPETMLGLDRAACLLADAAMASKRMLIV 74
           L P++  LL +RG+   +      +  L+ L  P  M  +++A   L  A    +++LI 
Sbjct: 27  LSPVVCLLLVQRGLTTVEEVKKFFKPSLNDLHDPFLMPDMEKAVKRLNKALGNKEKILIY 86

Query: 75  GDFDADGATSTSVCLLALKMLGIHGADFLIPNRFDYGYGLSVPLVALAVEKGAEVLITVD 134
           GD+D DG T+ S+    L+       D+ IP+R+D GYG+S   +  A E G  ++I++D
Sbjct: 87  GDYDVDGTTAVSLVYKYLRPYS-SALDYYIPDRYDEGYGISYKGINYARENGITLVISLD 145

Query: 135 NGISSIEGVAAAKAAGMQVVITDHHLPGQVLPDADAIVNPNQQGCTFASKSIAGVGVAFY 194
            GI +IE +  AK  G+  +I DHH+P   LPDA A+++  +    +  + ++G GV F 
Sbjct: 146 CGIKAIEKIEYAKQLGIDFIICDHHMPDDTLPDAVAVLDAKRVDSVYPYEHLSGCGVGFK 205

Query: 195 LMLALRAELRRRGWFEKLGIKEPNLAVLVDIVALGTVADVVSLDANNRILVDAGLKRVRA 254
            M A         + +       +L  L+++ A+   +D+V +   NRIL   GLK++ +
Sbjct: 206 FMQA---------FAKSNNFPFADLEKLLELTAVSIASDIVPITGENRILAYYGLKQLNS 256

Query: 255 GRCRPGITALLEVAKRNPARAVAADFGFAVGPRLNAAGRLDEMSLGVETLLCDDIMYARR 314
                G+  ++++   +      +D  F +GPR+NA+GR+      VE LL  D+  AR 
Sbjct: 257 NPSL-GLKGIIDICGLSGKEITISDIVFKIGPRINASGRMMNGKEAVELLLAKDVDVARE 315

Query: 315 MAAELDGLNQERRELETGMQAEALKSLERLQLEESQLPWGIALYQDDWHQGVIGILASRI 374
            +  ++  N+ERREL+  +  EA   ++  Q  E +    I +Y   WH+GVIGI+ASR+
Sbjct: 316 KSESINQYNEERRELDKKITDEANAIIDEFQNMEDRK--AIIVYNPGWHKGVIGIVASRL 373

Query: 375 KDKYHRPVIAFAEASDNEVKGSARSIKGLHMRDLLELISSRHPGLIPKFGGHAMAAGLSL 434
            +KY+RP +   ++S+  + GSARS+ G    D+ + I S    L+  FGGH  AAGLSL
Sbjct: 374 TEKYYRPAVVLTKSSE-LITGSARSVTGF---DIYKAIESCR-DLLENFGGHTYAAGLSL 428

Query: 435 AKADVSKFQTVFDDTVRELLSPELLTGEILSDGELPIEYLTLETANLIRASGPWGQGFEE 494
            + ++  F   F     + + PE +T +I  D  L ++ +  +  + ++   P+G   ++
Sbjct: 429 KEENLDAFTQRFLKLAADEIIPEQMTPQIDIDAVLDLQDINAKFMSELKKMNPFGPDNQK 488

Query: 495 PLFD--GHFRLLQQRLVGE--KHLKMMVETECGRLMLDAIAFNVDLKLWPDATVRHVHLA 550
           P+F   G       +LVG+  +H+K+ +  +     +  IAF +         ++  ++ 
Sbjct: 489 PVFCSLGVKDYGTSKLVGKDLEHIKLELIDDKSNTPIHGIAFGMHQHNTHIKNMKPFNIC 548

Query: 551 YRLDVNEFRGNQSLQLLVEQI 571
           Y ++ N + GN SLQL+V+ I
Sbjct: 549 YTIEENTYNGNTSLQLMVKDI 569