Pairwise Alignments

Query, 574 a.a., single-stranded-DNA-specific exonuclease RecJ (RefSeq) from Shewanella amazonensis SB2B

Subject, 585 a.a., single-stranded-DNA-specific exonuclease RecJ (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  250 bits (638), Expect = 1e-70
 Identities = 190/556 (34%), Positives = 280/556 (50%), Gaps = 30/556 (5%)

Query: 28  LARRGVAGDDCEQELSRLLR-----PETMLGLDRAACLLADAAMASKRMLIVGDFDADGA 82
           LARRGVA ++ E  L+  LR     P ++  ++RAA  +  A   ++R+ I  D+D DG 
Sbjct: 47  LARRGVAPEEAEDFLAPTLRALLPDPRSLRDMERAAARVNAAIARNERIAIFADYDVDGG 106

Query: 83  TSTSVCLLALKMLGIHGADFLIPNRFDYGYGLSVPLVALAVEKGAEVLITVDNGISSIEG 142
           +S ++ +  L+  G   A   +P+R D GYG ++P +  A+    +++I VD G  S + 
Sbjct: 107 SSAALLIDWLRAQG-RTATLYVPDRIDEGYGPNIPAME-ALADAHDLIICVDCGTLSHDP 164

Query: 143 VAAAKAAGMQVVITDHHLPGQVLPDADAIVNPNQQGCTFASKSIAGVGVAFYLMLALRAE 202
           VAAA+  G  VVI DHHL  + LP A A+VNPN+Q    +   +    V F L++    +
Sbjct: 165 VAAAQ--GTDVVILDHHLAEECLPAAHAVVNPNRQDEDGSLSHLCAAAVVFLLLVEANRQ 222

Query: 203 LRRRGWFEKLGIKEPNLAVLVDIVALGTVADVVSLDANNRILVDAGLKRVRAGRCRPGIT 262
            R  G          +L  L+D+VAL TVADV  L   NR  V  GL  V   R RPG+T
Sbjct: 223 QRAAGQ------PGQDLMALLDLVALATVADVAPLSGVNRAFVRQGLT-VMGRRERPGLT 275

Query: 263 ALLEVAKRNPARAVAADFGFAVGPRLNAAGRLDEMSLGVETLLCDDIMYARRMAAELDGL 322
           AL + A  + A + +   GF +GPR+NA GR+    LG   L   D   A  +A  L+ L
Sbjct: 276 ALSDSAGLDRAPS-SYHLGFVLGPRINAGGRIGAADLGARLLATRDPHEAAALAERLEKL 334

Query: 323 NQERRELETGMQAEALKSLERLQLEESQLPWGIALYQDDWHQGVIGILASRIKDKYHRPV 382
           N ERR++E  ++A AL+  E   L  + L W      + WH GV+GI+ASR+K+  +RP 
Sbjct: 335 NAERRDIEAQVRASALEQAETRGL-NAPLAWAAG---EGWHPGVVGIVASRLKETANRPA 390

Query: 383 IAFAEASDNEVKGSARSIKGLHMRDLLELISSRHPGLIPKFGGHAMAAGLSLAKADVSKF 442
           I      D E KGS RS+ G+ +   ++ ++  H GL+ K GGH MAAGL++ +  +   
Sbjct: 391 IVIGLEGD-EGKGSGRSVPGIDLGAAIQRLA--HEGLLLKGGGHKMAAGLTVRRDLLEPA 447

Query: 443 QTVFDDTVRELLSPELLTGEILSDGELPIEYLTLETANLIRASGPWGQGFEEPLFD-GHF 501
                + +    +  L    +  DG L    +T E    I  +GP+G     P F     
Sbjct: 448 MARLSELLAAQGADRLGPKGLHVDGVLSPRAITTELITRIEDAGPFGASAPAPRFALPSV 507

Query: 502 RLLQQRLVGEKHLKMMVETECGRLMLDAIAFNV-DLKLWP---DATVRHVHLAYRLDVNE 557
            +   + VGE HL+      CG  M D IAF   D  + P    +     HLA RL++N 
Sbjct: 508 TIRYAKPVGESHLRFSFAGPCGTRM-DGIAFGAFDTPIGPALSQSARGTFHLAGRLEINS 566

Query: 558 FRGNQSLQLLVEQIDA 573
           + G    QL ++   A
Sbjct: 567 WGGQHKAQLRLDDAAA 582