Pairwise Alignments

Query, 168 a.a., TRAP-type transport system, small permease component (RefSeq) from Shewanella amazonensis SB2B

Subject, 688 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 73.2 bits (178), Expect = 9e-18
 Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 3/149 (2%)

Query: 9   EGITEALGRLVGWFTLGMVLMTLAVVVLRYAFATGATALQETALYLHGAVFTLAAGFTLK 68
           +   + +G +V W  + ++   +A V+ RY        L E   + +GAV  +   + L 
Sbjct: 34  DNAVKGVGHVVMWANIALIAAIVAQVLFRYLLNQNFPKLDEIQWHFYGAVTMIGISYALV 93

Query: 69  RDAHVRVDVFYRQCSERTRHWIDFVGTLVFLFPLSLAIGLYSFDYVMNAWRIQESSAEAG 128
            D+HVRVD+ + Q S R++  I+ +G L  L PL   +    +DY   ++R+ E S    
Sbjct: 94  TDSHVRVDLLHMQLSRRSQRIIEVLGILFLLVPLIYLMVDQGWDYFYESYRVNERSDSPT 153

Query: 129 GLPWVYLQKSLLLGLCVSLILQGLCELYR 157
           GLP  +  K++   + +S +L G+  + R
Sbjct: 154 GLPLRWAFKAI---IPISFVLLGIAAVAR 179